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The map label for this gene is araE [C]

Identifier: 116496171

GI number: 116496171

Start: 2730604

End: 2731806

Strand: Direct

Name: araE [C]

Synonym: LSEI_2749

Alternate gene names: 116496171

Gene position: 2730604-2731806 (Clockwise)

Preceding gene: 116496154

Following gene: 116496172

Centisome position: 94.31

GC content: 46.8

Gene sequence:

>1203_bases
ATGTCACCATCTACCCCTGTCCACGAAGACAAACGTTCGCCAATGTTAGCGCTTGGCATCTTGTCGATTTCGTTCCTGAT
GTCTGTCAGCAACGCCGTCTCTGGTACGATCCCGTTGATGGAGAAATATTTCTCTGATGTCTCGCGAGCCAACGTCGAAT
TGCTGATCGTGATTCCGACTGGCGGTGTGTTGTTGGGTACGGTTATCAGTGGTCTGGTCTCCAATCTACTCGGAAAAAAG
TACACGGTTATTGCTGGGCTATCCATTTCACTCGTTTTTGGGATCATTCCTGCCTTCATCTTTAATTATCCAGCGATTTT
GATTTCGCGGGCAATGTTCGGGGTTGGCATGGGGATTTTCACGCCACTAAGCGTTTCCTATATCACGGATCTTTTCCCTG
AAGAGACACGTAATCGCCTGTTAGGCTGGCGTAATTCAGTTGGGGCGATCGGCGATTCCATCATGCTTTTCATCGCTGGC
TTTCTGATCAACATCAGTTGGCACACAACCTACTTGGTTTTCCTGTTCCTATTAGTCCCAATCCTCTTGGTGATGTTCTT
CGTACCAAAGCATTACGACAACATTGTTTCTGAAGATGGCAAGGAAGTTGAAGAAGACGTTAAGATAAAGCCGACGACCA
ATTTCGGTGTTATCCAGCTCGCGTTTATTTTCCTCCTTGTCTGCTTATTCTATTCCGCGATCTCACTAAAACTGGCGAGC
TACGTTGTCAACAATCACATTGGCAGTGCGGCGGCCGCCACGCGGATCTTCGGTTTCCTCGTCCTTTGCTCAATCTTCTC
AGGGCTGATTTTTGAAAAAATCGCTAAATGGTTCGGCAAGTATACGGTCACCATTTTCTATATCATCACTGCGATTTCGA
TGATTGTCATGTCCTTCACCACTTCCATTCCGGTGCTGTTGGTGCTGGTGCTGGCGGCAGGCTTCTGCAATGGCATCATC
AACCCGGCACTAACCGCGCGAATGGTGCACTATTCGCCAAAAGGTTCTATGAATTTCACGACATCCATCATCATTATTGG
CATCAACATCGGCTTTCTGATCGCGCCTTATTTCTTCCAATTCTTCGGTGAAATGATTGGCAATGCAGGCCCAGCCAATA
TGATTCTGTGGAGCGGCATCTTCTATGTTCTGTTAGCTGTCTATGACCTTGTCGTTGTTAAAAAAGACAAATTGACAATC
TGA

Upstream 100 bases:

>100_bases
CGTTGGCAGAAAAAGGGCAGTTGTCAGCTTGATGACAGGCCGCTTTCCCCTGCCAAAATGTGTGGAAGTAAGCAAAATTA
AATAAAGGAAGTGTGTCATC

Downstream 100 bases:

>100_bases
TCAGCGCGTGAGTCAAATCGGTCAGAAACCTGCGAGCACTTTTAATAGAGCGTGACCCATCATAACGCGCTCCCCGGCGC
AGCAACCGCGCTGGCTCGCG

Product: major facilitator superfamily permease

Products: Proton [Cytoplasm]; L-arabinose [Cytoplasm] [C]

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Transporter Protein; Permease Of Facilitator Superfamily; Ypothetical Protein SMU.; Facilitator Superfamily Transporter Permease; General Substrate Transporter Facilitator Superfamily; MFS Family Transporter Protein; Permease; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Facilitator Transporter; Multidrug Efflux Permease; Facilitator Superfamily Transporter Efflux Protein; MFS Family Transporter; Facilitator Family Protein

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSPSTPVHEDKRSPMLALGILSISFLMSVSNAVSGTIPLMEKYFSDVSRANVELLIVIPTGGVLLGTVISGLVSNLLGKK
YTVIAGLSISLVFGIIPAFIFNYPAILISRAMFGVGMGIFTPLSVSYITDLFPEETRNRLLGWRNSVGAIGDSIMLFIAG
FLINISWHTTYLVFLFLLVPILLVMFFVPKHYDNIVSEDGKEVEEDVKIKPTTNFGVIQLAFIFLLVCLFYSAISLKLAS
YVVNNHIGSAAAATRIFGFLVLCSIFSGLIFEKIAKWFGKYTVTIFYIITAISMIVMSFTTSIPVLLVLVLAAGFCNGII
NPALTARMVHYSPKGSMNFTTSIIIIGINIGFLIAPYFFQFFGEMIGNAGPANMILWSGIFYVLLAVYDLVVVKKDKLTI

Sequences:

>Translated_400_residues
MSPSTPVHEDKRSPMLALGILSISFLMSVSNAVSGTIPLMEKYFSDVSRANVELLIVIPTGGVLLGTVISGLVSNLLGKK
YTVIAGLSISLVFGIIPAFIFNYPAILISRAMFGVGMGIFTPLSVSYITDLFPEETRNRLLGWRNSVGAIGDSIMLFIAG
FLINISWHTTYLVFLFLLVPILLVMFFVPKHYDNIVSEDGKEVEEDVKIKPTTNFGVIQLAFIFLLVCLFYSAISLKLAS
YVVNNHIGSAAAATRIFGFLVLCSIFSGLIFEKIAKWFGKYTVTIFYIITAISMIVMSFTTSIPVLLVLVLAAGFCNGII
NPALTARMVHYSPKGSMNFTTSIIIIGINIGFLIAPYFFQFFGEMIGNAGPANMILWSGIFYVLLAVYDLVVVKKDKLTI
>Mature_399_residues
SPSTPVHEDKRSPMLALGILSISFLMSVSNAVSGTIPLMEKYFSDVSRANVELLIVIPTGGVLLGTVISGLVSNLLGKKY
TVIAGLSISLVFGIIPAFIFNYPAILISRAMFGVGMGIFTPLSVSYITDLFPEETRNRLLGWRNSVGAIGDSIMLFIAGF
LINISWHTTYLVFLFLLVPILLVMFFVPKHYDNIVSEDGKEVEEDVKIKPTTNFGVIQLAFIFLLVCLFYSAISLKLASY
VVNNHIGSAAAATRIFGFLVLCSIFSGLIFEKIAKWFGKYTVTIFYIITAISMIVMSFTTSIPVLLVLVLAAGFCNGIIN
PALTARMVHYSPKGSMNFTTSIIIIGINIGFLIAPYFFQFFGEMIGNAGPANMILWSGIFYVLLAVYDLVVVKKDKLTI

Specific function: Uptake Of Arabinose Across The Boundary Membrane With The Concomitant Transport Of Protons Into The Cell (Symport System). [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43786; Mature: 43655

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSTPVHEDKRSPMLALGILSISFLMSVSNAVSGTIPLMEKYFSDVSRANVELLIVIPT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECC
GGVLLGTVISGLVSNLLGKKYTVIAGLSISLVFGIIPAFIFNYPAILISRAMFGVGMGIF
CHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLSVSYITDLFPEETRNRLLGWRNSVGAIGDSIMLFIAGFLINISWHTTYLVFLFLLVP
HHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLVMFFVPKHYDNIVSEDGKEVEEDVKIKPTTNFGVIQLAFIFLLVCLFYSAISLKLAS
HHHHHHHHHHHHHHHHCCCCCHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVVNNHIGSAAAATRIFGFLVLCSIFSGLIFEKIAKWFGKYTVTIFYIITAISMIVMSFT
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSIPVLLVLVLAAGFCNGIINPALTARMVHYSPKGSMNFTTSIIIIGINIGFLIAPYFFQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCEEEEEEEEECCHHHHHHHHHHH
FFGEMIGNAGPANMILWSGIFYVLLAVYDLVVVKKDKLTI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SPSTPVHEDKRSPMLALGILSISFLMSVSNAVSGTIPLMEKYFSDVSRANVELLIVIPT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECC
GGVLLGTVISGLVSNLLGKKYTVIAGLSISLVFGIIPAFIFNYPAILISRAMFGVGMGIF
CHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLSVSYITDLFPEETRNRLLGWRNSVGAIGDSIMLFIAGFLINISWHTTYLVFLFLLVP
HHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLVMFFVPKHYDNIVSEDGKEVEEDVKIKPTTNFGVIQLAFIFLLVCLFYSAISLKLAS
HHHHHHHHHHHHHHHHCCCCCHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVVNNHIGSAAAATRIFGFLVLCSIFSGLIFEKIAKWFGKYTVTIFYIITAISMIVMSFT
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSIPVLLVLVLAAGFCNGIINPALTARMVHYSPKGSMNFTTSIIIIGINIGFLIAPYFFQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCEEEEEEEEECCHHHHHHHHHHH
FFGEMIGNAGPANMILWSGIFYVLLAVYDLVVVKKDKLTI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-arabinose [Periplasm] [C]

Specific reaction: L-arabinose = L-ribulose Proton [Periplasm] + arabinose [Periplasm] = Proton [Cytoplasm] + arabinose [Cytoplasm] [C]

General reaction: Isomerases; Intramolecular Oxidoreductases; Interconverting Aldoses and Ketoses; L-arabinose isomerase Reaction [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA