Click here to switch to the map view.

The map label for this gene is 116496174

Identifier: 116496174

GI number: 116496174

Start: 2733894

End: 2734466

Strand: Direct

Name: 116496174

Synonym: LSEI_2752

Alternate gene names: NA

Gene position: 2733894-2734466 (Clockwise)

Preceding gene: 116496172

Following gene: 116496175

Centisome position: 94.43

GC content: 45.9

Gene sequence:

>573_bases
ATGTACGAGTTATCAATTTTAGGAGCACTCATGTCGCGTGACATGTCTGGCTATAAACTGCGTCAAGTTCTTGGCAGTAA
TCTCGTTCCCCGCCGCGAGATTTCCAATGGGGTGATGTATCCAGTGTTGCAACAGTTACAGCACAAGGGGTACATCACCA
TATCGTTGGCTGAAAACAGTCCTCGTCATGAGAAAGTCGCTCACATTACAGACATTGGTCAGAAGCATTTCTATGCACTA
ATGGCTGCTCCAGTACCAGTGGATGCAAAACGAGAATCAGTTTACCTATTCAAATTTCGGTCATTGGCCGCTGTCGACTT
TGCGGAACAGTTGCAGATTCTAACTGAGTATGAAAACGTCAATGACCAAGACTTGAATGTGTACACGACCCTAAAAAAAC
ATTTGCAGCAACACACCAAACCGGGGAAAAGCGATCCCGCGTTGCTCAAGAGTACGATCAACACCCTTGAGCTAAACATT
GCACTTTGCCAGACGAAAAAACAGTGGGTAGCACAAACACGCACTCGCATTTTGCAACAGCAAACCACTGAAGGAGGCAT
GCATCATGCCTAA

Upstream 100 bases:

>100_bases
AACTGATTCGGAAGCTAGCAAAAATGTTAATATTTTTAATTGCAAAATATGTCGTCACGACCTATACTACTATGTGTCGT
TTCGACATATGGAGGTCATG

Downstream 100 bases:

>100_bases
TGCAACTATGATCACGACACCGAAGAGACATCAGTGGCTGGCATTGACCGCGATGAGCATGGGTGTCTTTATGGGATTAC
TTGACGTCACTGTTGTCAAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; PadR Family Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MYELSILGALMSRDMSGYKLRQVLGSNLVPRREISNGVMYPVLQQLQHKGYITISLAENSPRHEKVAHITDIGQKHFYAL
MAAPVPVDAKRESVYLFKFRSLAAVDFAEQLQILTEYENVNDQDLNVYTTLKKHLQQHTKPGKSDPALLKSTINTLELNI
ALCQTKKQWVAQTRTRILQQQTTEGGMHHA

Sequences:

>Translated_190_residues
MYELSILGALMSRDMSGYKLRQVLGSNLVPRREISNGVMYPVLQQLQHKGYITISLAENSPRHEKVAHITDIGQKHFYAL
MAAPVPVDAKRESVYLFKFRSLAAVDFAEQLQILTEYENVNDQDLNVYTTLKKHLQQHTKPGKSDPALLKSTINTLELNI
ALCQTKKQWVAQTRTRILQQQTTEGGMHHA
>Mature_190_residues
MYELSILGALMSRDMSGYKLRQVLGSNLVPRREISNGVMYPVLQQLQHKGYITISLAENSPRHEKVAHITDIGQKHFYAL
MAAPVPVDAKRESVYLFKFRSLAAVDFAEQLQILTEYENVNDQDLNVYTTLKKHLQQHTKPGKSDPALLKSTINTLELNI
ALCQTKKQWVAQTRTRILQQQTTEGGMHHA

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21602; Mature: 21602

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYELSILGALMSRDMSGYKLRQVLGSNLVPRREISNGVMYPVLQQLQHKGYITISLAENS
CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCEEEEECCCC
PRHEKVAHITDIGQKHFYALMAAPVPVDAKRESVYLFKFRSLAAVDFAEQLQILTEYENV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC
NDQDLNVYTTLKKHLQQHTKPGKSDPALLKSTINTLELNIALCQTKKQWVAQTRTRILQQ
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHH
QTTEGGMHHA
HHCCCCCCCC
>Mature Secondary Structure
MYELSILGALMSRDMSGYKLRQVLGSNLVPRREISNGVMYPVLQQLQHKGYITISLAENS
CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCEEEEECCCC
PRHEKVAHITDIGQKHFYALMAAPVPVDAKRESVYLFKFRSLAAVDFAEQLQILTEYENV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC
NDQDLNVYTTLKKHLQQHTKPGKSDPALLKSTINTLELNIALCQTKKQWVAQTRTRILQQ
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHH
QTTEGGMHHA
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA