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The map label for this gene is yidA [H]

Identifier: 116496154

GI number: 116496154

Start: 2714624

End: 2715445

Strand: Direct

Name: yidA [H]

Synonym: LSEI_2732

Alternate gene names: 116496154

Gene position: 2714624-2715445 (Clockwise)

Preceding gene: 116496122

Following gene: 116496171

Centisome position: 93.76

GC content: 42.58

Gene sequence:

>822_bases
ATGCTTAAAGCTATTGCCCTTGATATGGATAACACGTTACTTAATAGTCAAAAAGAAATTAGTGTCACGAATCAAGATGT
GCTCCGCTATCTTAGCCGCAAAGGTATACGTGTCATTCTCTGTTCTGGTAGGCCATTTGCCACTTTGAAGCCATTTTTGG
ATCAGCTTCATTTAACTAAAAATGATGATGTCTGCATTTGTTTCAACGGCGGCTTAGTCCGATTAGTAAGGGATCACACC
GTCATCAAATCTTCAACGCTGACTAAATCACAAATCCAGCCAGTTTATGATCTCGTTAAGGAGAAAGGTTTCCACTTAGA
TGTGGTTGCTGAAGATCAGGTGTATTCGTTAACTGAATTTGGTAAATCCAGCTATGAGTCCATGATTCCTAAACAAATGC
CATTTACCGATACGACATTTGCTAAGGTGCCAGCCAAATTATCGATTTTTAAAGTGGTCATCGCTGGCGATCCAGAAATG
GTTGATGCGGCTTCAGAAGCTGCGCAATCACTTGAGGGCGTCACCGTGACAAGATCACGACGTACCTTACTGGAAATCAT
GCCGCCTAATGTGAATAAGAAGAACGGTTTGAAAGCAGCCCTCAACTTTTATCGCATTCCGCGCGAGCAATTAGCCGCAT
TTGGCGATGAAGAAAACGATCAAGATATGCTTGACTACGCTGGTATTGGCATCGCCATGGGTAACGCGATTCCTGAAATC
AAGAAAATCGCTGATATTACGACGCAATCCAATGATGAAGATGGCGTTGCAAAATTCTTGATTGATTACTTCCAGATCAG
TCCAACTGCGATCCACCCATAA

Upstream 100 bases:

>100_bases
TTTAAAACTTAATGTACACAATGACCTGAAAACGCTTTTAACGCCGCCAACTCTGATATAATGGGTTGTAACCACGTGAA
GTTAGAAAGGAAGTTTACCC

Downstream 100 bases:

>100_bases
CTCGTCTAAAGCCACCTTCCATGAGGCGGCTTTTTTCGTGGGCGGCGTTTTTTCATCCGTTCGCCTGTTGTGATCAATAG
CTTTACACGACTACTAAACT

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLKAIALDMDNTLLNSQKEISVTNQDVLRYLSRKGIRVILCSGRPFATLKPFLDQLHLTKNDDVCICFNGGLVRLVRDHT
VIKSSTLTKSQIQPVYDLVKEKGFHLDVVAEDQVYSLTEFGKSSYESMIPKQMPFTDTTFAKVPAKLSIFKVVIAGDPEM
VDAASEAAQSLEGVTVTRSRRTLLEIMPPNVNKKNGLKAALNFYRIPREQLAAFGDEENDQDMLDYAGIGIAMGNAIPEI
KKIADITTQSNDEDGVAKFLIDYFQISPTAIHP

Sequences:

>Translated_273_residues
MLKAIALDMDNTLLNSQKEISVTNQDVLRYLSRKGIRVILCSGRPFATLKPFLDQLHLTKNDDVCICFNGGLVRLVRDHT
VIKSSTLTKSQIQPVYDLVKEKGFHLDVVAEDQVYSLTEFGKSSYESMIPKQMPFTDTTFAKVPAKLSIFKVVIAGDPEM
VDAASEAAQSLEGVTVTRSRRTLLEIMPPNVNKKNGLKAALNFYRIPREQLAAFGDEENDQDMLDYAGIGIAMGNAIPEI
KKIADITTQSNDEDGVAKFLIDYFQISPTAIHP
>Mature_273_residues
MLKAIALDMDNTLLNSQKEISVTNQDVLRYLSRKGIRVILCSGRPFATLKPFLDQLHLTKNDDVCICFNGGLVRLVRDHT
VIKSSTLTKSQIQPVYDLVKEKGFHLDVVAEDQVYSLTEFGKSSYESMIPKQMPFTDTTFAKVPAKLSIFKVVIAGDPEM
VDAASEAAQSLEGVTVTRSRRTLLEIMPPNVNKKNGLKAALNFYRIPREQLAAFGDEENDQDMLDYAGIGIAMGNAIPEI
KKIADITTQSNDEDGVAKFLIDYFQISPTAIHP

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=267, Percent_Identity=32.9588014981273, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1786982, Length=272, Percent_Identity=25.3676470588235, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87081790, Length=266, Percent_Identity=24.0601503759398, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787043, Length=265, Percent_Identity=25.6603773584906, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30301; Mature: 30301

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKAIALDMDNTLLNSQKEISVTNQDVLRYLSRKGIRVILCSGRPFATLKPFLDQLHLTK
CCEEEEECCCHHHHCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCC
NDDVCICFNGGLVRLVRDHTVIKSSTLTKSQIQPVYDLVKEKGFHLDVVAEDQVYSLTEF
CCCEEEEECCCEEEEEHHCHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH
GKSSYESMIPKQMPFTDTTFAKVPAKLSIFKVVIAGDPEMVDAASEAAQSLEGVTVTRSR
HHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCEEEECCH
RTLLEIMPPNVNKKNGLKAALNFYRIPREQLAAFGDEENDQDMLDYAGIGIAMGNAIPEI
HHEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHCCHHHHCCCCHHH
KKIADITTQSNDEDGVAKFLIDYFQISPTAIHP
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKAIALDMDNTLLNSQKEISVTNQDVLRYLSRKGIRVILCSGRPFATLKPFLDQLHLTK
CCEEEEECCCHHHHCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCC
NDDVCICFNGGLVRLVRDHTVIKSSTLTKSQIQPVYDLVKEKGFHLDVVAEDQVYSLTEF
CCCEEEEECCCEEEEEHHCHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH
GKSSYESMIPKQMPFTDTTFAKVPAKLSIFKVVIAGDPEMVDAASEAAQSLEGVTVTRSR
HHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCEEEECCH
RTLLEIMPPNVNKKNGLKAALNFYRIPREQLAAFGDEENDQDMLDYAGIGIAMGNAIPEI
HHEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHCCHHHHCCCCHHH
KKIADITTQSNDEDGVAKFLIDYFQISPTAIHP
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]