| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is prsA [H]
Identifier: 116495723
GI number: 116495723
Start: 2270025
End: 2270924
Strand: Direct
Name: prsA [H]
Synonym: LSEI_2271
Alternate gene names: 116495723
Gene position: 2270025-2270924 (Clockwise)
Preceding gene: 116495721
Following gene: 116495726
Centisome position: 78.4
GC content: 42.44
Gene sequence:
>900_bases ATGAAGAAAAAAATGCGCCTTAAAGTATTATTGGCAAGTACCGCAACTGCTTTACTGCTGCTAAGCGGTTGTCAGTCAAA TCAGGCCGACCAAACAGTTGCGACCTATTCAGGCGGCAAGGTGACTGAAAGTAACTTCTATAAGGAACTCAAACAGTCAC CAACGACAAAGACCATGCTTGCTAACATGCTCATTTATCGTGCATTGAATCATGCCTATGGAAAATCGGTTAGCACTAAA ACAGTTAATGACGCCTATGATAGCTACAAACAACAATACGGCGAAAATTTCGATGCTTTCTTAAGTCAAAACGGTTTCAG TCGCAGTAGCTTCAAGGAAAGCCTACGAACCAACTTTTTAAGTGAAGTTGCACTGAAAAAGTTAAAAAAGGTTTCTGAAA GCCAGCTCAAGGCCGCTTGGAAGACCTATCAGCCCAAAGTGACTGTCCAACATATTCTAACTAGCGACGAGGACACTGCT AAGCAAGTTATCAGTGATTTAGCAGCTGGCCAGGATTTTGCCACGCTTGCGAAAACTGATTCCATTGATACTGCGACTAA AGATAACGGCGGGAAGATTAGTTTTGAATCAAACAATAAAACGCTCGATGCCACATTTAAGGATGCTGCCTACAAATTAA AAAATGGTGACTACACGCAGACACCAGTCAAAGTGACAGACGGGTATGAAGTTATTAAAATGATTAACCATCCCGCCAAA GGCACCTTTACTAGCAGTAAAAAGGCGCTAACCGCCAGCGTTTACGCTAAATGGTCCCGCGATTCAAGCATCATGCAACG CGTTATCAGTCAGGTATTGAAGAACCAGAATGTGACGATTAAAGACAAGGATCTTGCGGATGCGCTAGATAGTTATAAGA AGCTTGCGACAACGAATTAA
Upstream 100 bases:
>100_bases GCATTATTAGAAAATGAGTATTTGCATTGAAATTCTCAATTGCCAACGCTAGAATAAATACACAACGTTTACTGTAAGCA TTTCAGAGGAGACCTAGTCG
Downstream 100 bases:
>100_bases GGCTTAACCGAGTAAGCTGAAATAACAGCCAGTTCTTTTAGAAATTGGACATCAACGCCCCGAAAGTCATAGCAACATGA CTTTCGGGGCGTTTTATGTA
Product: peptidylprolyl isomerase
Products: NA
Alternate protein names: Protease maturation protein prtM [H]
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKKKMRLKVLLASTATALLLLSGCQSNQADQTVATYSGGKVTESNFYKELKQSPTTKTMLANMLIYRALNHAYGKSVSTK TVNDAYDSYKQQYGENFDAFLSQNGFSRSSFKESLRTNFLSEVALKKLKKVSESQLKAAWKTYQPKVTVQHILTSDEDTA KQVISDLAAGQDFATLAKTDSIDTATKDNGGKISFESNNKTLDATFKDAAYKLKNGDYTQTPVKVTDGYEVIKMINHPAK GTFTSSKKALTASVYAKWSRDSSIMQRVISQVLKNQNVTIKDKDLADALDSYKKLATTN
Sequences:
>Translated_299_residues MKKKMRLKVLLASTATALLLLSGCQSNQADQTVATYSGGKVTESNFYKELKQSPTTKTMLANMLIYRALNHAYGKSVSTK TVNDAYDSYKQQYGENFDAFLSQNGFSRSSFKESLRTNFLSEVALKKLKKVSESQLKAAWKTYQPKVTVQHILTSDEDTA KQVISDLAAGQDFATLAKTDSIDTATKDNGGKISFESNNKTLDATFKDAAYKLKNGDYTQTPVKVTDGYEVIKMINHPAK GTFTSSKKALTASVYAKWSRDSSIMQRVISQVLKNQNVTIKDKDLADALDSYKKLATTN >Mature_299_residues MKKKMRLKVLLASTATALLLLSGCQSNQADQTVATYSGGKVTESNFYKELKQSPTTKTMLANMLIYRALNHAYGKSVSTK TVNDAYDSYKQQYGENFDAFLSQNGFSRSSFKESLRTNFLSEVALKKLKKVSESQLKAAWKTYQPKVTVQHILTSDEDTA KQVISDLAAGQDFATLAKTDSIDTATKDNGGKISFESNNKTLDATFKDAAYKLKNGDYTQTPVKVTDGYEVIKMINHPAK GTFTSSKKALTASVYAKWSRDSSIMQRVISQVLKNQNVTIKDKDLADALDSYKKLATTN
Specific function: This protein is essential for production of active forms of the serine proteinase located in or secreted from the cell envelope [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 33085; Mature: 33085
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKMRLKVLLASTATALLLLSGCQSNQADQTVATYSGGKVTESNFYKELKQSPTTKTML CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHH ANMLIYRALNHAYGKSVSTKTVNDAYDSYKQQYGENFDAFLSQNGFSRSSFKESLRTNFL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHH SEVALKKLKKVSESQLKAAWKTYQPKVTVQHILTSDEDTAKQVISDLAAGQDFATLAKTD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCC SIDTATKDNGGKISFESNNKTLDATFKDAAYKLKNGDYTQTPVKVTDGYEVIKMINHPAK CCCCCCCCCCCEEEECCCCCEEEEHHHHHHHEECCCCCCCCCEEECCCHHHHHHHCCCCC GTFTSSKKALTASVYAKWSRDSSIMQRVISQVLKNQNVTIKDKDLADALDSYKKLATTN CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKKMRLKVLLASTATALLLLSGCQSNQADQTVATYSGGKVTESNFYKELKQSPTTKTML CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHH ANMLIYRALNHAYGKSVSTKTVNDAYDSYKQQYGENFDAFLSQNGFSRSSFKESLRTNFL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHH SEVALKKLKKVSESQLKAAWKTYQPKVTVQHILTSDEDTAKQVISDLAAGQDFATLAKTD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCC SIDTATKDNGGKISFESNNKTLDATFKDAAYKLKNGDYTQTPVKVTDGYEVIKMINHPAK CCCCCCCCCCCEEEECCCCCEEEEHHHHHHHEECCCCCCCCCEEECCCHHHHHHHCCCCC GTFTSSKKALTASVYAKWSRDSSIMQRVISQVLKNQNVTIKDKDLADALDSYKKLATTN CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2708318; 2501630; 11473599; 3278687; 2166472; 1906066 [H]