Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116495720

Identifier: 116495720

GI number: 116495720

Start: 2262424

End: 2262837

Strand: Direct

Name: 116495720

Synonym: LSEI_2268

Alternate gene names: NA

Gene position: 2262424-2262837 (Clockwise)

Preceding gene: 116495705

Following gene: 116495721

Centisome position: 78.14

GC content: 45.65

Gene sequence:

>414_bases
ATGTTAATGCAAACACATCTTTATCAGGAACTTCCTGTTTATCAGGATACGCAAATTGGCGCCTTGAAGGCCATCGCTCT
AAAGTTGACCAATGATTTCAATTTTGACTATCAAGAGGTTCTAAGTTCCTTGTTAGCCAGCGCGGGTGAGCAAACGCAAA
CCATCAACGATCAGGCAATCTTAACGTATGGTCATGTCACCAGTTTGACAGAACCTGTTGTTATTGGCTTTGATTTTGGC
AAGGCTTTACCTTGGGCCGCTGGTCACCAAATCAGTCAGGCGATTGTCTTGTTAGTCCCTGTCGACACAGCTGAGGCAAC
CATTCAGGATCGGCTTCAGACAATCTCCGCGGCAATTGCACAAGATCAGGATTTGAAAACAATGACCCAAACGGCAACAG
CTGCAATCGCTTAG

Upstream 100 bases:

>100_bases
TCCGCCAAAGCTTGATCCGACGCGCTTAGAAACCACATTTAGGCAATGATCTCAATCAAGTCAGCAGTTATTTTCAATCA
ACTCATAGGAGGTAAACATC

Downstream 100 bases:

>100_bases
TCATGCTCACAATGAGCTACTGCATTAAGATCAACGTTTATGTCACAAAAGTCGGCATATCAGGGTCTAAAACAAAATGA
CCACTGACACGTCGGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAILTYGHVTSLTEPVVIGFDFG
KALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIAQDQDLKTMTQTATAAIA

Sequences:

>Translated_137_residues
MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAILTYGHVTSLTEPVVIGFDFG
KALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIAQDQDLKTMTQTATAAIA
>Mature_137_residues
MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAILTYGHVTSLTEPVVIGFDFG
KALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIAQDQDLKTMTQTATAAIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14834; Mature: 14834

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAI
CCCHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE
LTYGHVTSLTEPVVIGFDFGKALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIA
EEECCHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
QDQDLKTMTQTATAAIA
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAI
CCCHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE
LTYGHVTSLTEPVVIGFDFGKALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIA
EEECCHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
QDQDLKTMTQTATAAIA
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA