| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495720
Identifier: 116495720
GI number: 116495720
Start: 2262424
End: 2262837
Strand: Direct
Name: 116495720
Synonym: LSEI_2268
Alternate gene names: NA
Gene position: 2262424-2262837 (Clockwise)
Preceding gene: 116495705
Following gene: 116495721
Centisome position: 78.14
GC content: 45.65
Gene sequence:
>414_bases ATGTTAATGCAAACACATCTTTATCAGGAACTTCCTGTTTATCAGGATACGCAAATTGGCGCCTTGAAGGCCATCGCTCT AAAGTTGACCAATGATTTCAATTTTGACTATCAAGAGGTTCTAAGTTCCTTGTTAGCCAGCGCGGGTGAGCAAACGCAAA CCATCAACGATCAGGCAATCTTAACGTATGGTCATGTCACCAGTTTGACAGAACCTGTTGTTATTGGCTTTGATTTTGGC AAGGCTTTACCTTGGGCCGCTGGTCACCAAATCAGTCAGGCGATTGTCTTGTTAGTCCCTGTCGACACAGCTGAGGCAAC CATTCAGGATCGGCTTCAGACAATCTCCGCGGCAATTGCACAAGATCAGGATTTGAAAACAATGACCCAAACGGCAACAG CTGCAATCGCTTAG
Upstream 100 bases:
>100_bases TCCGCCAAAGCTTGATCCGACGCGCTTAGAAACCACATTTAGGCAATGATCTCAATCAAGTCAGCAGTTATTTTCAATCA ACTCATAGGAGGTAAACATC
Downstream 100 bases:
>100_bases TCATGCTCACAATGAGCTACTGCATTAAGATCAACGTTTATGTCACAAAAGTCGGCATATCAGGGTCTAAAACAAAATGA CCACTGACACGTCGGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAILTYGHVTSLTEPVVIGFDFG KALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIAQDQDLKTMTQTATAAIA
Sequences:
>Translated_137_residues MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAILTYGHVTSLTEPVVIGFDFG KALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIAQDQDLKTMTQTATAAIA >Mature_137_residues MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAILTYGHVTSLTEPVVIGFDFG KALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIAQDQDLKTMTQTATAAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14834; Mature: 14834
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAI CCCHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE LTYGHVTSLTEPVVIGFDFGKALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIA EEECCHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH QDQDLKTMTQTATAAIA CCCCHHHHHHHHHHHCC >Mature Secondary Structure MLMQTHLYQELPVYQDTQIGALKAIALKLTNDFNFDYQEVLSSLLASAGEQTQTINDQAI CCCHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE LTYGHVTSLTEPVVIGFDFGKALPWAAGHQISQAIVLLVPVDTAEATIQDRLQTISAAIA EEECCHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH QDQDLKTMTQTATAAIA CCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA