| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is ansA [H]
Identifier: 116495705
GI number: 116495705
Start: 2248188
End: 2249162
Strand: Direct
Name: ansA [H]
Synonym: LSEI_2253
Alternate gene names: 116495705
Gene position: 2248188-2249162 (Clockwise)
Preceding gene: 116495698
Following gene: 116495720
Centisome position: 77.65
GC content: 50.77
Gene sequence:
>975_bases GTGACTAAACATATTCTCGTTTTGCATACGGGTGGTACCATTTCGATGACTGAAAATAGCGAAGGTGACATTATGCCCAG CCAACATAACCCGTTACTTGGTGCTGACAGTTTTGTCCCTGCTGACGTCGAACTCACCACTGAAGAAATTTTCAACCTCC CATCCCCGCACATGACCCCAGAACGGATGCTAGAACTAGTTAAACGCATCCGCCAAGCGGAAAAAGAAGGCAGCGATGGC GTCGTGATCACTCACGGGACGGATACGCTGGAAGAAACCGCCTATTTTCTTGATCTGACCCTTGATTCGGCGATGCCAGT GGTCGTGACAGGCGCTATGCGCTCTAGTAACGAAATCGGCAGCGATGGTCTGGAGAACCTTCAAAGCGCCATTAAAACGG CTGCCAGCGACGACTCACGCAATAAGGGAACGCTCGTTGTCATGAATGACGAAATTCATACCGCTCGGTTCGTGACCAAG ACGCACACGACCAACGTGGCTACTTTCCGAACACCAACATTCGGTCCAGTCGGTTTGGTCACCAAAGATGGCGTCCGATT CTTTCAGGAGTTGATTAATCAGGAAGTCTGTGCGATTGATCACCTCGTCGACAAGGTCTTCCTCATCAAAGCATATGCTG GCATGGATGGTACCTTGTTCGATGCACTGCCTGAAGATACGCACGGCTTGACGATTGAAGCGCTCGGTGCCGGCAATCTA CCGCCGACCACCTTACCTGCCATTCAACGGCTGCTGGATCGCAACATCCCGATTGTTCTCGTTTCCCGCTGTTTTAATGG TGTTGCGCAAGCCGTTTACAATTACGAAGGCGGTGGTGTGCAACTTAAGAAAATGGGCATCATTTTCTGTCAAGGCTTGA ATGGCCAAAAGGCACGAATCAAGTTGCAAGTCGGCCTCAGTGACGGCAAACAAGGGCAGGATCTAGCCGACTTCGTGGAT AATGCTGTTAGCTGA
Upstream 100 bases:
>100_bases CACCTAATTATGGGTGTTCGCGCCATTGACTTTAGCTGTTCGCGGCTGCATAAAGAGCCGTATAATGAAATGCGACAACG TTTGAAAGGAAGATATGACC
Downstream 100 bases:
>100_bases CAATTAACAAATAGCTGGGATTATCCTCGATTTCGAAGACCGCAACGCAAAAACGGCACTAAGCAAAAAAAGAGACGTTT GCTTAGTGCCGTTTTACTAT
Product: L-asparaginase
Products: NA
Alternate protein names: L-ASNase; L-asparagine amidohydrolase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTKHILVLHTGGTISMTENSEGDIMPSQHNPLLGADSFVPADVELTTEEIFNLPSPHMTPERMLELVKRIRQAEKEGSDG VVITHGTDTLEETAYFLDLTLDSAMPVVVTGAMRSSNEIGSDGLENLQSAIKTAASDDSRNKGTLVVMNDEIHTARFVTK THTTNVATFRTPTFGPVGLVTKDGVRFFQELINQEVCAIDHLVDKVFLIKAYAGMDGTLFDALPEDTHGLTIEALGAGNL PPTTLPAIQRLLDRNIPIVLVSRCFNGVAQAVYNYEGGGVQLKKMGIIFCQGLNGQKARIKLQVGLSDGKQGQDLADFVD NAVS
Sequences:
>Translated_324_residues MTKHILVLHTGGTISMTENSEGDIMPSQHNPLLGADSFVPADVELTTEEIFNLPSPHMTPERMLELVKRIRQAEKEGSDG VVITHGTDTLEETAYFLDLTLDSAMPVVVTGAMRSSNEIGSDGLENLQSAIKTAASDDSRNKGTLVVMNDEIHTARFVTK THTTNVATFRTPTFGPVGLVTKDGVRFFQELINQEVCAIDHLVDKVFLIKAYAGMDGTLFDALPEDTHGLTIEALGAGNL PPTTLPAIQRLLDRNIPIVLVSRCFNGVAQAVYNYEGGGVQLKKMGIIFCQGLNGQKARIKLQVGLSDGKQGQDLADFVD NAVS >Mature_323_residues TKHILVLHTGGTISMTENSEGDIMPSQHNPLLGADSFVPADVELTTEEIFNLPSPHMTPERMLELVKRIRQAEKEGSDGV VITHGTDTLEETAYFLDLTLDSAMPVVVTGAMRSSNEIGSDGLENLQSAIKTAASDDSRNKGTLVVMNDEIHTARFVTKT HTTNVATFRTPTFGPVGLVTKDGVRFFQELINQEVCAIDHLVDKVFLIKAYAGMDGTLFDALPEDTHGLTIEALGAGNLP PTTLPAIQRLLDRNIPIVLVSRCFNGVAQAVYNYEGGGVQLKKMGIIFCQGLNGQKARIKLQVGLSDGKQGQDLADFVDN AVS
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1789327, Length=281, Percent_Identity=35.5871886120996, Blast_Score=144, Evalue=7e-36, Organism=Escherichia coli, GI1788065, Length=281, Percent_Identity=29.5373665480427, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI193207374, Length=350, Percent_Identity=24.5714285714286, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193207372, Length=350, Percent_Identity=24.5714285714286, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17558278, Length=350, Percent_Identity=24.5714285714286, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17558280, Length=350, Percent_Identity=24.5714285714286, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323189, Length=324, Percent_Identity=30.2469135802469, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323187, Length=324, Percent_Identity=30.2469135802469, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323186, Length=324, Percent_Identity=30.2469135802469, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323184, Length=324, Percent_Identity=30.2469135802469, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320527, Length=317, Percent_Identity=27.1293375394322, Blast_Score=113, Evalue=4e-26, Organism=Drosophila melanogaster, GI24645530, Length=238, Percent_Identity=28.9915966386555, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 35006; Mature: 34875
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHILVLHTGGTISMTENSEGDIMPSQHNPLLGADSFVPADVELTTEEIFNLPSPHMTP CCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHCCCCCCCCH ERMLELVKRIRQAEKEGSDGVVITHGTDTLEETAYFLDLTLDSAMPVVVTGAMRSSNEIG HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHEEEEEEEECCCCCEEEEECCCCCCCCC SDGLENLQSAIKTAASDDSRNKGTLVVMNDEIHTARFVTKTHTTNVATFRTPTFGPVGLV CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCEE TKDGVRFFQELINQEVCAIDHLVDKVFLIKAYAGMDGTLFDALPEDTHGLTIEALGAGNL EHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEECCCCC PPTTLPAIQRLLDRNIPIVLVSRCFNGVAQAVYNYEGGGVQLKKMGIIFCQGLNGQKARI CCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEE KLQVGLSDGKQGQDLADFVDNAVS EEEEECCCCCCCCHHHHHHHHCCC >Mature Secondary Structure TKHILVLHTGGTISMTENSEGDIMPSQHNPLLGADSFVPADVELTTEEIFNLPSPHMTP CCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHCCCCCCCCH ERMLELVKRIRQAEKEGSDGVVITHGTDTLEETAYFLDLTLDSAMPVVVTGAMRSSNEIG HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHEEEEEEEECCCCCEEEEECCCCCCCCC SDGLENLQSAIKTAASDDSRNKGTLVVMNDEIHTARFVTKTHTTNVATFRTPTFGPVGLV CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCEE TKDGVRFFQELINQEVCAIDHLVDKVFLIKAYAGMDGTLFDALPEDTHGLTIEALGAGNL EHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEECCCCC PPTTLPAIQRLLDRNIPIVLVSRCFNGVAQAVYNYEGGGVQLKKMGIIFCQGLNGQKARI CCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEE KLQVGLSDGKQGQDLADFVDNAVS EEEEECCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1916233 [H]