Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116495319

Identifier: 116495319

GI number: 116495319

Start: 1850309

End: 1850734

Strand: Direct

Name: 116495319

Synonym: LSEI_1852

Alternate gene names: NA

Gene position: 1850309-1850734 (Clockwise)

Preceding gene: 116495317

Following gene: 116495335

Centisome position: 63.91

GC content: 46.95

Gene sequence:

>426_bases
ATGACTTATGAAGAAAAAATCGGCACCGAAAGATTCGATGCCATGGTGGCGGATTTTTTCGCAAATCGTTACTTTGATCG
CGGCATGCGTAAATGGCAAGGCTACTATCTTTCTGATCATACAGCCGCTTTAAAGAAGCAATCTAAAAGTGAAGCGCTGG
TTTATCCCCCGCTGCCCCTTCAGGATCAAGCGGTCATTCGCGCAATCTTGCTACAAGCCTATGCAGAAGGCCAAACAGTA
ACAGCCCAGCTTAACCTGCAAACGCCTAGTGGTCAGATGCTGCCACCGATTCGCGGCAAGGTTGGCGGTTTAACTGACAG
TGACGTGGTTAATATTGCGGATCAAAATATGGCAATCGGATCAATTCGGCACATCGAACTCATCCCATTTGCTGCATCAA
CGCATCAAAAAAATACGCCAGACTAA

Upstream 100 bases:

>100_bases
GCGGCATTCTCGCTGTCATCTTTTTGTAACATTTAAAAAGCGGTGGTTTCCTCTTGTTGGAGCAAACATATGTTCGTATA
ATCGATTTGAGGTGATCATC

Downstream 100 bases:

>100_bases
GGTAGTCGGCCGTACCGCCGGGGCTCAAATTTCGTGCAATCATTTCGGCGTTTAAAGCGCGCAACCCATTAGGTAGCCGG
GACGCCGGTACATGTAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTYEEKIGTERFDAMVADFFANRYFDRGMRKWQGYYLSDHTAALKKQSKSEALVYPPLPLQDQAVIRAILLQAYAEGQTV
TAQLNLQTPSGQMLPPIRGKVGGLTDSDVVNIADQNMAIGSIRHIELIPFAASTHQKNTPD

Sequences:

>Translated_141_residues
MTYEEKIGTERFDAMVADFFANRYFDRGMRKWQGYYLSDHTAALKKQSKSEALVYPPLPLQDQAVIRAILLQAYAEGQTV
TAQLNLQTPSGQMLPPIRGKVGGLTDSDVVNIADQNMAIGSIRHIELIPFAASTHQKNTPD
>Mature_140_residues
TYEEKIGTERFDAMVADFFANRYFDRGMRKWQGYYLSDHTAALKKQSKSEALVYPPLPLQDQAVIRAILLQAYAEGQTVT
AQLNLQTPSGQMLPPIRGKVGGLTDSDVVNIADQNMAIGSIRHIELIPFAASTHQKNTPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15714; Mature: 15583

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYEEKIGTERFDAMVADFFANRYFDRGMRKWQGYYLSDHTAALKKQSKSEALVYPPLPL
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHCCCCCEEEECCCCC
QDQAVIRAILLQAYAEGQTVTAQLNLQTPSGQMLPPIRGKVGGLTDSDVVNIADQNMAIG
CHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEC
SIRHIELIPFAASTHQKNTPD
CEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TYEEKIGTERFDAMVADFFANRYFDRGMRKWQGYYLSDHTAALKKQSKSEALVYPPLPL
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHCCCCCEEEECCCCC
QDQAVIRAILLQAYAEGQTVTAQLNLQTPSGQMLPPIRGKVGGLTDSDVVNIADQNMAIG
CHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEC
SIRHIELIPFAASTHQKNTPD
CEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA