| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495335
Identifier: 116495335
GI number: 116495335
Start: 1862968
End: 1863462
Strand: Direct
Name: 116495335
Synonym: LSEI_1868
Alternate gene names: NA
Gene position: 1862968-1863462 (Clockwise)
Preceding gene: 116495319
Following gene: 116495337
Centisome position: 64.35
GC content: 47.68
Gene sequence:
>495_bases ATGAAACTGCATTTTTCAAAAGCACAATTGAACGACCTTGATACGATCATGACTATCGAAACAACAGGATTTACGCCACA AGAGGCCGCCACTAGAACCTGCATGGCATCACGCATTACCAACTATCCGGACACCTTCATTGTTGCCCGCGCTGGTGGCA CGATTGTTGGTTACGTAGTCGGGCCAGCAACTGATCAACCAACGATTACAGATGATCTTTTCAGTACTAGTCAGCCCAAT CGGCCCGATGATCCGTACATCGCTGTCTTAAGCCTCGCTGTATCCCCGCGCCATCGTCATCAAAATGTCGGCTCTCAATT ACTTGAGCAACTAACCCAGATCGCACGTACACAAAACCGCCAAGCGATCACCTTAACCTGTCTACAACGGTTGATCCCTT TTTACGAACATCAAGGCTTTCAAAATGAAGGTCGTGCTGCCTCTACTCATGCTGGCGAAGTCTGGTACAACATGGTTAAA AAGATGCTCTACTGA
Upstream 100 bases:
>100_bases CGCAAGAGCATGCTTAACGTCTTGCTAATCTTGACTAATCGCTTATCCATCATTGTCCGTTCCCTTTTACACCCTTTAAC CTTAACTAGGAGAGAAAACG
Downstream 100 bases:
>100_bases CAGCCTTCCTCAGCTTATTCGGGATTCAGATGTTGGCGCAACACCGGGGCGGTTTCGTTGACCAGAAAAAGCGGGCCATC TGCCTGCGCCGGAAAACTCG
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Acetyltransferase Family Protein; GCN5-Like N-Acetyltransferase; NH2-Acetyltransferase; Acyltransferase; Arylalkylamine N-Acetyltransferase; Acetyltransferase RimI Family; Histone Acetyltransferase HPA2-Like Acetyltransferase
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKLHFSKAQLNDLDTIMTIETTGFTPQEAATRTCMASRITNYPDTFIVARAGGTIVGYVVGPATDQPTITDDLFSTSQPN RPDDPYIAVLSLAVSPRHRHQNVGSQLLEQLTQIARTQNRQAITLTCLQRLIPFYEHQGFQNEGRAASTHAGEVWYNMVK KMLY
Sequences:
>Translated_164_residues MKLHFSKAQLNDLDTIMTIETTGFTPQEAATRTCMASRITNYPDTFIVARAGGTIVGYVVGPATDQPTITDDLFSTSQPN RPDDPYIAVLSLAVSPRHRHQNVGSQLLEQLTQIARTQNRQAITLTCLQRLIPFYEHQGFQNEGRAASTHAGEVWYNMVK KMLY >Mature_164_residues MKLHFSKAQLNDLDTIMTIETTGFTPQEAATRTCMASRITNYPDTFIVARAGGTIVGYVVGPATDQPTITDDLFSTSQPN RPDDPYIAVLSLAVSPRHRHQNVGSQLLEQLTQIARTQNRQAITLTCLQRLIPFYEHQGFQNEGRAASTHAGEVWYNMVK KMLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18344; Mature: 18344
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHFSKAQLNDLDTIMTIETTGFTPQEAATRTCMASRITNYPDTFIVARAGGTIVGYVV CCCCCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEE GPATDQPTITDDLFSTSQPNRPDDPYIAVLSLAVSPRHRHQNVGSQLLEQLTQIARTQNR CCCCCCCCCCHHHHCCCCCCCCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC QAITLTCLQRLIPFYEHQGFQNEGRAASTHAGEVWYNMVKKMLY CEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MKLHFSKAQLNDLDTIMTIETTGFTPQEAATRTCMASRITNYPDTFIVARAGGTIVGYVV CCCCCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEE GPATDQPTITDDLFSTSQPNRPDDPYIAVLSLAVSPRHRHQNVGSQLLEQLTQIARTQNR CCCCCCCCCCHHHHCCCCCCCCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC QAITLTCLQRLIPFYEHQGFQNEGRAASTHAGEVWYNMVKKMLY CEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA