| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495317
Identifier: 116495317
GI number: 116495317
Start: 1848543
End: 1849352
Strand: Direct
Name: 116495317
Synonym: LSEI_1850
Alternate gene names: NA
Gene position: 1848543-1849352 (Clockwise)
Preceding gene: 116495315
Following gene: 116495319
Centisome position: 63.85
GC content: 45.8
Gene sequence:
>810_bases ATGCAAGTGGAAAAAGACGTGATCTACGATAGCGCCTATAATTTAGCCGCCGATCTCTATGTACCTGACGAAGCCAATGG CGGTGCCATCGTGTATGCACACGGCGGTGGCTGGTTTCGCGGCGATAAGGAAAATGAAAGCGATTTAGGTAAATATTTTG CCGATGCCGGCTATCTATTTACGATTCCGAACTTTCGCTTAGCCCCTAAATATTTATATCCAACAGCACAAAACGATTTC GATCATTTCATTAATTGGTTACTTGCTTCCCCTTACGATTTTGATCGTGAGCGTTTGGGACTTTTGGGGGCAAGTTCAGG CGGCACCATGGTTCTGCAAAACAGTTTAGCTTCCGGCTATCCGCTCGTTGCATGGTCCCCTGTTGTTGATTTTGCCAACT GGGTTCAAAAAAATCAAATGGTAAAGGCTTCTGTGGATGGGAAAAAAGAACTTGGTCTTACCGAGATCCACGAAATTCAT GATTCATTTTACAAGTATTTCGTGCAGACTTACCTTGGCGGCTTAGACCCGCGTTTGTTGACCGCGGTCAATCCCACCAA CCATTTAACCGATCAATTAGGTCCGGCATTGTTGTTCAATTCAGCTGATGAATTGATGCCACTGCCAAGTGCCTTGCACT TTTTACAACAAGCTGCCATGTTTGGTCGCGATATCGGACTGCATGTTGTACCCGGAACCGGTCATGCCCGCGACTACACA AGTTTTGCCTTGCCAGAAACCAAGCGCTTTTTTGATCATCACTTGTTTACGACGGTTGAAGACAAAACGTTGAACAAAGC GACAGACTGA
Upstream 100 bases:
>100_bases TAAAACCGAACGAATCGGAATCCAGATTTGCATTTAAACGGGTTTTGGGACTATGGTTAGACTATGGTTAATGTACAAGA ATAAGGAGGAACAGGCAAAT
Downstream 100 bases:
>100_bases GCTTAACAACAAATTCGGTCAGTAAAATAGCGTTGCGATCAACCTTCATTCCGAATGGTGATCGCAACGCTATTTTTATG CGTCAATTTTAACAAACATC
Product: esterase/lipase
Products: NA
Alternate protein names: Esterase; Esterase/Lipase-Like; Carboxylic Ester Hydrolase; Alpha/Beta Hydrolase Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MQVEKDVIYDSAYNLAADLYVPDEANGGAIVYAHGGGWFRGDKENESDLGKYFADAGYLFTIPNFRLAPKYLYPTAQNDF DHFINWLLASPYDFDRERLGLLGASSGGTMVLQNSLASGYPLVAWSPVVDFANWVQKNQMVKASVDGKKELGLTEIHEIH DSFYKYFVQTYLGGLDPRLLTAVNPTNHLTDQLGPALLFNSADELMPLPSALHFLQQAAMFGRDIGLHVVPGTGHARDYT SFALPETKRFFDHHLFTTVEDKTLNKATD
Sequences:
>Translated_269_residues MQVEKDVIYDSAYNLAADLYVPDEANGGAIVYAHGGGWFRGDKENESDLGKYFADAGYLFTIPNFRLAPKYLYPTAQNDF DHFINWLLASPYDFDRERLGLLGASSGGTMVLQNSLASGYPLVAWSPVVDFANWVQKNQMVKASVDGKKELGLTEIHEIH DSFYKYFVQTYLGGLDPRLLTAVNPTNHLTDQLGPALLFNSADELMPLPSALHFLQQAAMFGRDIGLHVVPGTGHARDYT SFALPETKRFFDHHLFTTVEDKTLNKATD >Mature_269_residues MQVEKDVIYDSAYNLAADLYVPDEANGGAIVYAHGGGWFRGDKENESDLGKYFADAGYLFTIPNFRLAPKYLYPTAQNDF DHFINWLLASPYDFDRERLGLLGASSGGTMVLQNSLASGYPLVAWSPVVDFANWVQKNQMVKASVDGKKELGLTEIHEIH DSFYKYFVQTYLGGLDPRLLTAVNPTNHLTDQLGPALLFNSADELMPLPSALHFLQQAAMFGRDIGLHVVPGTGHARDYT SFALPETKRFFDHHLFTTVEDKTLNKATD
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29993; Mature: 29993
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVEKDVIYDSAYNLAADLYVPDEANGGAIVYAHGGGWFRGDKENESDLGKYFADAGYLF CCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE TIPNFRLAPKYLYPTAQNDFDHFINWLLASPYDFDRERLGLLGASSGGTMVLQNSLASGY ECCCCEECCCEECCCCCCCHHHHHHHHHCCCCCCCHHHHCEEECCCCCEEEEECCCCCCC PLVAWSPVVDFANWVQKNQMVKASVDGKKELGLTEIHEIHDSFYKYFVQTYLGGLDPRLL CEEEEHHHHHHHHHHHHCCEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE TAVNPTNHLTDQLGPALLFNSADELMPLPSALHFLQQAAMFGRDIGLHVVPGTGHARDYT EEECCCHHHHHHHCHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC SFALPETKRFFDHHLFTTVEDKTLNKATD HHCCCHHHHHHHHHHHEEECCCCCCCCCC >Mature Secondary Structure MQVEKDVIYDSAYNLAADLYVPDEANGGAIVYAHGGGWFRGDKENESDLGKYFADAGYLF CCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE TIPNFRLAPKYLYPTAQNDFDHFINWLLASPYDFDRERLGLLGASSGGTMVLQNSLASGY ECCCCEECCCEECCCCCCCHHHHHHHHHCCCCCCCHHHHCEEECCCCCEEEEECCCCCCC PLVAWSPVVDFANWVQKNQMVKASVDGKKELGLTEIHEIHDSFYKYFVQTYLGGLDPRLL CEEEEHHHHHHHHHHHHCCEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE TAVNPTNHLTDQLGPALLFNSADELMPLPSALHFLQQAAMFGRDIGLHVVPGTGHARDYT EEECCCHHHHHHHCHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC SFALPETKRFFDHHLFTTVEDKTLNKATD HHCCCHHHHHHHHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA