| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495086
Identifier: 116495086
GI number: 116495086
Start: 1599819
End: 1600133
Strand: Direct
Name: 116495086
Synonym: LSEI_1604
Alternate gene names: NA
Gene position: 1599819-1600133 (Clockwise)
Preceding gene: 116495073
Following gene: 116495100
Centisome position: 55.26
GC content: 47.3
Gene sequence:
>315_bases ATGGTCTCAACCTTTATTTACTGGGCCGTGTTTGCCGCTCTCGCTGCTTGGGGACTGTGGAGTTTGGTCTTCTCATGTGT TTACCTGAGCAACCATGAAAACGGCAATTTGTGGTTCTTTGCTATCATTAATGCGATTCTTGGCCTTCTAGGCTGGTTAT TCGCTTGGATCATGAGTAATACGGCATGGCAACAATACTGGTTTGCAAGTAAGGTGCAGCCATCTGCATGGTTCACCTAC CTGCTCATCGGTTACCTTGTCTTGATTGTCCTACAGGTCATCCTTGGCCGGGAGAAGAAAGTGCAAGCAGCTTAA
Upstream 100 bases:
>100_bases GGCCACTTATGCTCCGGTTTCTAACCGCGCCTGTTCGCGCTCTTCCAGTTTCCCCTAGTTTCGTGGTACACTGAACATGT GAAAAATTGGAGGGAAGAAT
Downstream 100 bases:
>100_bases TGTCATAAAAAAAGCGTCGTACTGGTTTTTCGCCAGCACGGCGCTTTTTCGTTATTCTTCATTTTAATTAAGCTTCGACC TGAATCAAACCCTTAAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSNTAWQQYWFASKVQPSAWFTY LLIGYLVLIVLQVILGREKKVQAA
Sequences:
>Translated_104_residues MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSNTAWQQYWFASKVQPSAWFTY LLIGYLVLIVLQVILGREKKVQAA >Mature_104_residues MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSNTAWQQYWFASKVQPSAWFTY LLIGYLVLIVLQVILGREKKVQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11971; Mature: 11971
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC TAWQQYWFASKVQPSAWFTYLLIGYLVLIVLQVILGREKKVQAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC TAWQQYWFASKVQPSAWFTYLLIGYLVLIVLQVILGREKKVQAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA