| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494359
Identifier: 116494359
GI number: 116494359
Start: 813067
End: 813381
Strand: Direct
Name: 116494359
Synonym: LSEI_0815
Alternate gene names: NA
Gene position: 813067-813381 (Clockwise)
Preceding gene: 116494355
Following gene: 116494360
Centisome position: 28.08
GC content: 45.4
Gene sequence:
>315_bases ATGGCTGATAAATTTCAAGTTTTCGATTTAATTCAAGAAATCACACGGAATGACGGTAGTCGCTATTTTGAACTAGGTAA CGTCATGATGAACGGTCGGGCGGAAAAGGCGGCTATGAAGGGGCTTATTAAACGTGTGCGGATCGTTCAACTAAACATTC CCCATTCAACTGCTGTGACAGCTTACGAACAGTACATCAACGATCATTATGAATTCCCGTCAGCTGATTTGACGAGCTGG GAAGAGTGGGACAAACCAGAAGGGCCGGTACGTCAGGCTTACCACGAGATTCTGAAGCAGAACCATGTTGGATGA
Upstream 100 bases:
>100_bases GAAAAAAACATCATACCATAAACATAGCACCGCAAAGTAGCCGGGACAATTTTTAGAACACGACAAGCAGTGGCTAAATT GATAAAGGAGTATGAAGAAC
Downstream 100 bases:
>100_bases GTGGTGATATCGCTGGATCGTCAGCGACAGTAACAATTTAAACAAAACCTAACAAACACTGGCATTCACACTGGTAACGT TGGCTTGGGTGATGCTAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVTAYEQYINDHYEFPSADLTSW EEWDKPEGPVRQAYHEILKQNHVG
Sequences:
>Translated_104_residues MADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVTAYEQYINDHYEFPSADLTSW EEWDKPEGPVRQAYHEILKQNHVG >Mature_103_residues ADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVTAYEQYINDHYEFPSADLTSWE EWDKPEGPVRQAYHEILKQNHVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12098; Mature: 11967
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVT CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCHHHHH AYEQYINDHYEFPSADLTSWEEWDKPEGPVRQAYHEILKQNHVG HHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure ADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVT CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCHHHHH AYEQYINDHYEFPSADLTSWEEWDKPEGPVRQAYHEILKQNHVG HHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA