Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494072

Identifier: 116494072

GI number: 116494072

Start: 515647

End: 516090

Strand: Direct

Name: 116494072

Synonym: LSEI_0514

Alternate gene names: NA

Gene position: 515647-516090 (Clockwise)

Preceding gene: 116494071

Following gene: 116494073

Centisome position: 17.81

GC content: 46.62

Gene sequence:

>444_bases
GTGGTGCGAGCAACGAGATATTTTAGCCCAATTGATCATGATAAAACAATTGAAAACGCCAAAGAGGTCTTGGGGAACTA
CTGGCATCACAAGCGGCTCGCTCAACGCACCAAAATAGTGCTCAGAAGTCCCGTGATGGACGGCATGCCTAAGTCACCTA
GCTATGGAAATAAAGCCGAGGACAAGCTCGTATCGCACGCTGACGAGCTGTACTATATAGCGTGCTGTGAAGGCGCTATT
GAATCTATAGAGAATGAAGACTACCGGATCATTTTAGTTGAGAGCTATCTGACTCCAAAGACGACACGTAAATCCAGCCT
TCAGTTAGCCGCTCACTTGCATGTTGACCGAACGACCCTTTGGCGACAAACACAAGAAGCTCTCTATGCTTTTGCTGAAA
TATGTCCGCTAGTGAAACTAGATGCAACATCCGTGCAACAATGA

Upstream 100 bases:

>100_bases
ATTATTTGAACAGCAGGTATATCACAAAAAACAAAAGCGCACCACGAAGGCACGCTTATCCTACAAACCCAACCAAATCA
TACCATAAGGAGTGGACGCA

Downstream 100 bases:

>100_bases
TGCAACAAAAAACACGCTTTTCTGCCTTATTATGTTATTGTGCCAAAGGTGAGAAACCTGAGACACCGCGTTTTTCCTCC
GAGCCTCAGTGATGATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MVRATRYFSPIDHDKTIENAKEVLGNYWHHKRLAQRTKIVLRSPVMDGMPKSPSYGNKAEDKLVSHADELYYIACCEGAI
ESIENEDYRIILVESYLTPKTTRKSSLQLAAHLHVDRTTLWRQTQEALYAFAEICPLVKLDATSVQQ

Sequences:

>Translated_147_residues
MVRATRYFSPIDHDKTIENAKEVLGNYWHHKRLAQRTKIVLRSPVMDGMPKSPSYGNKAEDKLVSHADELYYIACCEGAI
ESIENEDYRIILVESYLTPKTTRKSSLQLAAHLHVDRTTLWRQTQEALYAFAEICPLVKLDATSVQQ
>Mature_147_residues
MVRATRYFSPIDHDKTIENAKEVLGNYWHHKRLAQRTKIVLRSPVMDGMPKSPSYGNKAEDKLVSHADELYYIACCEGAI
ESIENEDYRIILVESYLTPKTTRKSSLQLAAHLHVDRTTLWRQTQEALYAFAEICPLVKLDATSVQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16881; Mature: 16881

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRATRYFSPIDHDKTIENAKEVLGNYWHHKRLAQRTKIVLRSPVMDGMPKSPSYGNKAE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
DKLVSHADELYYIACCEGAIESIENEDYRIILVESYLTPKTTRKSSLQLAAHLHVDRTTL
HHHHHHHHHEEEEEECHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHH
WRQTQEALYAFAEICPLVKLDATSVQQ
HHHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure
MVRATRYFSPIDHDKTIENAKEVLGNYWHHKRLAQRTKIVLRSPVMDGMPKSPSYGNKAE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
DKLVSHADELYYIACCEGAIESIENEDYRIILVESYLTPKTTRKSSLQLAAHLHVDRTTL
HHHHHHHHHEEEEEECHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHH
WRQTQEALYAFAEICPLVKLDATSVQQ
HHHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA