| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is nhaK [H]
Identifier: 116493536
GI number: 116493536
Start: 1788363
End: 1790462
Strand: Direct
Name: nhaK [H]
Synonym: PEPE_1810
Alternate gene names: 116493536
Gene position: 1788363-1790462 (Clockwise)
Preceding gene: 116493535
Following gene: 116493537
Centisome position: 97.6
GC content: 38.67
Gene sequence:
>2100_bases TTGCAAACATTTTACACAATTGCACTACTTTTAACAGGTGTAATCTTATCTAATATTATTAAACAACTTGTGCCTCGAAT TCCCGAAGCATTTATTTTAATTATCGTTGGAGTAATCCTATCATTTACCCCAGCATTTCATAATTTTGAATTAAGACCAG AATTTTTTATGTTAGTGGTTATTGCACCTATCATGTTTATAGATGGTCAAAAACAATCCTTCAATCGAATTCGCCAACGT TTTCGCGTGGTATTTTTTCTGTCGGTAGTTTTAGCTGGCGCCAGCGCTTTAGTTGTTGGAATCTTAACTAATAATTTTGA AACCAAATGGACGCTACCAGTGGCCATTGCCCTAGCAGCCATCGTTACTCCCACCGATGCGGTTGCTGTTAAATCGATGA CCAGCGGAACTGCCATGCCCGAAAATGTTAATGAAGCTTTAGAACTAGAATCCTTATTTAACGATGCCACTGGACTGGTA ATCCTTGATTTAGCTTTATCTGTTTTACAAAATGGAACTTTTTCAGCAATTACCGGAGTCGAACATTTTATTTTTGTCGC GCTTGGTGGCGTAATCATTGGAATTATTGCCGGCTTTTTAATTGTTTCTCTTCGCGTTAATTTAAACATGCGCGCTAATA ATCCGGAAACTATCATCATTCCGATTAGTCTGTTGACCCCTTTTCTCGTCTATCTTTTAGCTGAACATTTGGGAACTTCT GGCATTCTAGCCGTCGTTGCTACTGGAATGGTTCATAATTGGGAATCTGAACGCCTCCGTTTAACTTCAACTCGAGTTCA GCTTACCTCAGCAACCGTCTGGAATACTATCTCAAGTTTCCTAAATAGCGTCGTTTTCTTATTCCTTGGAGTGACTTTAC CGATGGTTTGGAAAGATTTTATCCAGATGGGAACGATGACGATTGCTCAATTAATTGGTATTAGTTTACTGATTTATCTA TCAATGCTAGCTATCCGTTACTGGTGGTCTGTTCATGAAAATCCAGACAATCCTGACCATTTCTTAGGCCCACATGACAA ATCCGTGCATCAGCTATGGTCAAGGATATTTGCAATTAGTGGTGTGCATGGGACCGTGACTTTGGCGATGGCCTTTTCAC TTCCTACTAGAATCGGTGGTCATCCCTTCCCTTATCGTGAAGAATTAATTGTGATTGCCACGCTAGTAATTTTAATTAGT ATGTTAGTCAGTGCTATCAGTCTTCCGCTGATGCTTCCTGTCAAAACGACGGAATATTCACTCGCTGATATCGATCATGT TCGTAATAAGATGGTGGATTATGCTACTTTACAACTACGTGATACCATCGATGATCACGCGGTTCGTGAGGCTTTAACGG AACAGTTGCAGTCCCAAAAAGGGGCATTGAATGGCCAAATTATTGATTTTGATGAATATCAGGAGTTAATGTTTGAAACC AAAGACTTCATTGTCACTTACATTCATGGACCTTCAATTTCAGCTAAATATAGTTTAGAAGTTGTTAATATCTATGAAAA AATTCTAAATAATTTTGTAGCTCCTAACTTTAATCCTCGGGAGCACTTTGCTAACCGAGTACATTATATATTTAAAAAGA ACTTTAAAAAGGTATCAGGTCTTTGCAAACACGCCCTCTGGCACGTCAAAAATGGGCAAATTACCAAACATCAACGTACC GTTGCTCGTCAAAAATGGTTGGCTGCTCAACCTTCGGATACATTCCAACAACGTCTGGACGTTCGGGATGCTCTTTTGGA ACTCAACAATGAAGTGATCGACTCTACTGATAAATACTTAGACGATGTTTTGCGTGGTCGCTTATTACGTAAACAAAGTA ATAACCAATATATTAACCTCGTTCGTAGATCTATCAATCGATACTGCTCAATGGTTCGTCATGATTATAATAAACAGGCA GTCTTTGTAAGTAGCGATTTATACATTCAAGCCTTTCAGCAAGAATATAACTTTATTCAACGTGGAGTAAGCCGTGGGGT TATTACCCCAGAAATGGCAACTGTGCTCTATGATGAGATTAATCAAGCTCAATCACTACAATTACAACGTACTCAACAGC TTCAAATTATTACATCTTAA
Upstream 100 bases:
>100_bases ATATCACATGCTGTAGTAAAATGAGACGATGAAGTCATCATCTCATTTTTTGTTATAATGACTTCTATAAATTTTATTCA TAGGAGATTAGGTAGTAACC
Downstream 100 bases:
>100_bases GCATTTTAAAAACACCTCTTGCGCGTTACTTATTTATAAGTAGCACATAGGAGGTGTTTTAGTTCGAATTAAATTAATTT AAACAAATTTTGAACTTCAT
Product: NhaP-type Na+/H+ and K+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MQTFYTIALLLTGVILSNIIKQLVPRIPEAFILIIVGVILSFTPAFHNFELRPEFFMLVVIAPIMFIDGQKQSFNRIRQR FRVVFFLSVVLAGASALVVGILTNNFETKWTLPVAIALAAIVTPTDAVAVKSMTSGTAMPENVNEALELESLFNDATGLV ILDLALSVLQNGTFSAITGVEHFIFVALGGVIIGIIAGFLIVSLRVNLNMRANNPETIIIPISLLTPFLVYLLAEHLGTS GILAVVATGMVHNWESERLRLTSTRVQLTSATVWNTISSFLNSVVFLFLGVTLPMVWKDFIQMGTMTIAQLIGISLLIYL SMLAIRYWWSVHENPDNPDHFLGPHDKSVHQLWSRIFAISGVHGTVTLAMAFSLPTRIGGHPFPYREELIVIATLVILIS MLVSAISLPLMLPVKTTEYSLADIDHVRNKMVDYATLQLRDTIDDHAVREALTEQLQSQKGALNGQIIDFDEYQELMFET KDFIVTYIHGPSISAKYSLEVVNIYEKILNNFVAPNFNPREHFANRVHYIFKKNFKKVSGLCKHALWHVKNGQITKHQRT VARQKWLAAQPSDTFQQRLDVRDALLELNNEVIDSTDKYLDDVLRGRLLRKQSNNQYINLVRRSINRYCSMVRHDYNKQA VFVSSDLYIQAFQQEYNFIQRGVSRGVITPEMATVLYDEINQAQSLQLQRTQQLQIITS
Sequences:
>Translated_699_residues MQTFYTIALLLTGVILSNIIKQLVPRIPEAFILIIVGVILSFTPAFHNFELRPEFFMLVVIAPIMFIDGQKQSFNRIRQR FRVVFFLSVVLAGASALVVGILTNNFETKWTLPVAIALAAIVTPTDAVAVKSMTSGTAMPENVNEALELESLFNDATGLV ILDLALSVLQNGTFSAITGVEHFIFVALGGVIIGIIAGFLIVSLRVNLNMRANNPETIIIPISLLTPFLVYLLAEHLGTS GILAVVATGMVHNWESERLRLTSTRVQLTSATVWNTISSFLNSVVFLFLGVTLPMVWKDFIQMGTMTIAQLIGISLLIYL SMLAIRYWWSVHENPDNPDHFLGPHDKSVHQLWSRIFAISGVHGTVTLAMAFSLPTRIGGHPFPYREELIVIATLVILIS MLVSAISLPLMLPVKTTEYSLADIDHVRNKMVDYATLQLRDTIDDHAVREALTEQLQSQKGALNGQIIDFDEYQELMFET KDFIVTYIHGPSISAKYSLEVVNIYEKILNNFVAPNFNPREHFANRVHYIFKKNFKKVSGLCKHALWHVKNGQITKHQRT VARQKWLAAQPSDTFQQRLDVRDALLELNNEVIDSTDKYLDDVLRGRLLRKQSNNQYINLVRRSINRYCSMVRHDYNKQA VFVSSDLYIQAFQQEYNFIQRGVSRGVITPEMATVLYDEINQAQSLQLQRTQQLQIITS >Mature_699_residues MQTFYTIALLLTGVILSNIIKQLVPRIPEAFILIIVGVILSFTPAFHNFELRPEFFMLVVIAPIMFIDGQKQSFNRIRQR FRVVFFLSVVLAGASALVVGILTNNFETKWTLPVAIALAAIVTPTDAVAVKSMTSGTAMPENVNEALELESLFNDATGLV ILDLALSVLQNGTFSAITGVEHFIFVALGGVIIGIIAGFLIVSLRVNLNMRANNPETIIIPISLLTPFLVYLLAEHLGTS GILAVVATGMVHNWESERLRLTSTRVQLTSATVWNTISSFLNSVVFLFLGVTLPMVWKDFIQMGTMTIAQLIGISLLIYL SMLAIRYWWSVHENPDNPDHFLGPHDKSVHQLWSRIFAISGVHGTVTLAMAFSLPTRIGGHPFPYREELIVIATLVILIS MLVSAISLPLMLPVKTTEYSLADIDHVRNKMVDYATLQLRDTIDDHAVREALTEQLQSQKGALNGQIIDFDEYQELMFET KDFIVTYIHGPSISAKYSLEVVNIYEKILNNFVAPNFNPREHFANRVHYIFKKNFKKVSGLCKHALWHVKNGQITKHQRT VARQKWLAAQPSDTFQQRLDVRDALLELNNEVIDSTDKYLDDVLRGRLLRKQSNNQYINLVRRSINRYCSMVRHDYNKQA VFVSSDLYIQAFQQEYNFIQRGVSRGVITPEMATVLYDEINQAQSLQLQRTQQLQIITS
Specific function: Transporter involved in the efflux of sodium, potassium, lithium and rubidium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. Nhak (TC 2.A.36.3.2) subfamily [H]
Homologues:
Organism=Homo sapiens, GI15529998, Length=498, Percent_Identity=24.4979919678715, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI148727259, Length=361, Percent_Identity=25.4847645429363, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1790501, Length=428, Percent_Identity=31.3084112149533, Blast_Score=171, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71999819, Length=469, Percent_Identity=22.8144989339019, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71999817, Length=469, Percent_Identity=22.8144989339019, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71980847, Length=478, Percent_Identity=24.0585774058577, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR018417 - InterPro: IPR004705 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 78867; Mature: 78867
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTFYTIALLLTGVILSNIIKQLVPRIPEAFILIIVGVILSFTPAFHNFELRPEFFMLVV CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IAPIMFIDGQKQSFNRIRQRFRVVFFLSVVLAGASALVVGILTNNFETKWTLPVAIALAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHEEHHHHCCCCCEEHHHHHHHHHH IVTPTDAVAVKSMTSGTAMPENVNEALELESLFNDATGLVILDLALSVLQNGTFSAITGV HHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH EHFIFVALGGVIIGIIAGFLIVSLRVNLNMRANNPETIIIPISLLTPFLVYLLAEHLGTS HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCC GILAVVATGMVHNWESERLRLTSTRVQLTSATVWNTISSFLNSVVFLFLGVTLPMVWKDF HHHHHHHHHHHCCCCCCCEEEEHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQMGTMTIAQLIGISLLIYLSMLAIRYWWSVHENPDNPDHFLGPHDKSVHQLWSRIFAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GVHGTVTLAMAFSLPTRIGGHPFPYREELIVIATLVILISMLVSAISLPLMLPVKTTEYS CCCHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH LADIDHVRNKMVDYATLQLRDTIDDHAVREALTEQLQSQKGALNGQIIDFDEYQELMFET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHH KDFIVTYIHGPSISAKYSLEVVNIYEKILNNFVAPNFNPREHFANRVHYIFKKNFKKVSG HHHEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LCKHALWHVKNGQITKHQRTVARQKWLAAQPSDTFQQRLDVRDALLELNNEVIDSTDKYL HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHH DDVLRGRLLRKQSNNQYINLVRRSINRYCSMVRHDYNKQAVFVSSDLYIQAFQQEYNFIQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH RGVSRGVITPEMATVLYDEINQAQSLQLQRTQQLQIITS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure MQTFYTIALLLTGVILSNIIKQLVPRIPEAFILIIVGVILSFTPAFHNFELRPEFFMLVV CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IAPIMFIDGQKQSFNRIRQRFRVVFFLSVVLAGASALVVGILTNNFETKWTLPVAIALAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHEEHHHHCCCCCEEHHHHHHHHHH IVTPTDAVAVKSMTSGTAMPENVNEALELESLFNDATGLVILDLALSVLQNGTFSAITGV HHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH EHFIFVALGGVIIGIIAGFLIVSLRVNLNMRANNPETIIIPISLLTPFLVYLLAEHLGTS HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCC GILAVVATGMVHNWESERLRLTSTRVQLTSATVWNTISSFLNSVVFLFLGVTLPMVWKDF HHHHHHHHHHHCCCCCCCEEEEHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQMGTMTIAQLIGISLLIYLSMLAIRYWWSVHENPDNPDHFLGPHDKSVHQLWSRIFAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GVHGTVTLAMAFSLPTRIGGHPFPYREELIVIATLVILISMLVSAISLPLMLPVKTTEYS CCCHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH LADIDHVRNKMVDYATLQLRDTIDDHAVREALTEQLQSQKGALNGQIIDFDEYQELMFET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHH KDFIVTYIHGPSISAKYSLEVVNIYEKILNNFVAPNFNPREHFANRVHYIFKKNFKKVSG HHHEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LCKHALWHVKNGQITKHQRTVARQKWLAAQPSDTFQQRLDVRDALLELNNEVIDSTDKYL HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHH DDVLRGRLLRKQSNNQYINLVRRSINRYCSMVRHDYNKQAVFVSSDLYIQAFQQEYNFIQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH RGVSRGVITPEMATVLYDEINQAQSLQLQRTQQLQIITS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]