| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is gpmA [H]
Identifier: 116493433
GI number: 116493433
Start: 1683216
End: 1683824
Strand: Direct
Name: gpmA [H]
Synonym: PEPE_1705
Alternate gene names: 116493433
Gene position: 1683216-1683824 (Clockwise)
Preceding gene: 116493424
Following gene: 116493440
Centisome position: 91.86
GC content: 39.9
Gene sequence:
>609_bases GTGGATTTAACAATTGTACGACATAGTATTAGTAGCGATAACGGTCGCGGATTAATTTCGGGGGCTGGTTCTGATGTTGA TCTTTCAGAAGCTGGAATCGAGTTAGCCCAAGAGGCTCAACGTGCTTTTGACTGGAATCAATTTGATCAAGTTTTCTCTA GTCCCATGCGTCGGGCTAAACAAACGGCCGAATTACTCTTAGGTGACCAAGCTTCAGCGATTAATTTTGATGAACGTTTA ACTGAAATGAATTTTGGAGACTGGGATGGAACTGCCGAAGACGCAATTTTTGAACAATATCCTGAAATTTTCAATCAAAT GGGAATGTTTAATGAGAAGTATTCCGATTATGCACCCAATTCAGAAAGTTACGATGAGCTGGTTAACCGCGTAACAGGCT TTTTAGATGAATTGAAGCAAAAATATCCGACTGCATCAATCCTACTCATTTGTCACGGAATGACTACGCGAGCCCTCTTT GCTGCCTTACTCCACGTCAGTCCTGCCCAATTTGGTAAGATTGGCAACGTTACTCTAAATCAAATTCATCTAGATGAAAC TAATCATTTTGAACCCCGCATTGATCTTTACAATCAAAAATTAAATTAA
Upstream 100 bases:
>100_bases CAAAACATATCTAAACTAGAAAAATACTCTCAATGTCTAAGTTATGGTATCATCGTAAATGTAAGCGTATTAACAAACAA AAACGGCGGTGACTTAAACA
Downstream 100 bases:
>100_bases AAAACGGATTGAAGCCTCCAACATCATGAAGGTTTCAATCCATTTTTTATTTACACACTAGCTTTCGAATTTAGATATTT CTTTTCTGCTTCCTTTCGGG
Product: fructose-2,6-bisphosphatase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAKQTAELLLGDQASAINFDERL TEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPNSESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALF AALLHVSPAQFGKIGNVTLNQIHLDETNHFEPRIDLYNQKLN
Sequences:
>Translated_202_residues MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAKQTAELLLGDQASAINFDERL TEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPNSESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALF AALLHVSPAQFGKIGNVTLNQIHLDETNHFEPRIDLYNQKLN >Mature_202_residues MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAKQTAELLLGDQASAINFDERL TEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPNSESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALF AALLHVSPAQFGKIGNVTLNQIHLDETNHFEPRIDLYNQKLN
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786857, Length=164, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 22764; Mature: 22764
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAK CCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QTAELLLGDQASAINFDERLTEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPN HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCC SESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALFAALLHVSPAQFGKIGNVTLN CCCHHHHHHHHHHHHHHHHHHCCCCEEHEEECCHHHHHHHHHHHHCCHHHHCCCCCCEEE QIHLDETNHFEPRIDLYNQKLN EEECCCCCCCCCHHHHHCCCCC >Mature Secondary Structure MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAK CCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QTAELLLGDQASAINFDERLTEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPN HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCC SESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALFAALLHVSPAQFGKIGNVTLN CCCHHHHHHHHHHHHHHHHHHCCCCEEHEEECCHHHHHHHHHHHHCCHHHHCCCCCCEEE QIHLDETNHFEPRIDLYNQKLN EEECCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA