Click here to switch to the map view.

The map label for this gene is 116493324

Identifier: 116493324

GI number: 116493324

Start: 1564576

End: 1565340

Strand: Direct

Name: 116493324

Synonym: PEPE_1596

Alternate gene names: NA

Gene position: 1564576-1565340 (Clockwise)

Preceding gene: 116493323

Following gene: 116493327

Centisome position: 85.38

GC content: 35.95

Gene sequence:

>765_bases
ATGATTATCTTTCTTTTAATTATCGCAGTCATCGCAACGTTCCTTTCGATGACACTTATCTCTAAAACAGCTGTCCGTGT
TATTTGTTCTGCTATTTCTGCAATCGTCGTAATCGCTTCGGTTGCTTTGATGGTAATGAATGATCGTGAACATTTTGGGA
TGCATAAAATTACTGAAACAACTACCCAAGAAATCTACTCAGTCTCACCTTCTAAACAAATGAGCATGTTACTCTATAAG
AGTATCGGTACCGCTGATAAAGATCGAGTTTATATCTACAATAAGACTACTTCTCAAAAGAAACCTAGTCATACTGAAAC
TGATAAAACTACTAACAAGGTTAAAACAACTAAAAAGAGTACGGCTCGTTTAGTTAAATCTACAACCCGTTGGACTTATA
AGAACAACACTTACAAGTTCTGGTTTGGAATTGCCGGTAATAACCGTGAAGTTTCAAAACGTGTTAATACTTTCTACGTT
CCTAATAATTGGATTACCTTATCAACAGAACAAGCCGCTAAGCTTCAAAAGAACGTTAAAAAGAATCAAGCTCAAATGAA
AGCTGATGCTGAAAAGTATGTTAAAGCTAAGGTCACAGCTACTGTGAAGTCAACAATGGCTGCAGCACTTAAGAAGAATC
CTACAATGAGTGCTAGTGATCAAAAGAAACTAATGGCTGATACAACGGCTAAAGCTTCTAAACAATATGCTGCTCAATAT
CAAGCTCAAATGATGCAGAAGATGATTGAAGAAGCTAAGAAATAA

Upstream 100 bases:

>100_bases
CTATTGGCTTTAGTGCCCTTGGTTTAATCATCGCATTCTTTGTAAGTCGTAAAGCAGGCAGCACTGCCAAAGTACAACCT
CAAGCAGGAGGTAATAAATA

Downstream 100 bases:

>100_bases
TTACAACTAATAAAAACACGCTGAACTTTTGAAGTTCAACGTGTTTTTTGTTATTCAATTATTTTTAACAAAGCTTGACG
AAACTTTTTAAACTGTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MIIFLLIIAVIATFLSMTLISKTAVRVICSAISAIVVIASVALMVMNDREHFGMHKITETTTQEIYSVSPSKQMSMLLYK
SIGTADKDRVYIYNKTTSQKKPSHTETDKTTNKVKTTKKSTARLVKSTTRWTYKNNTYKFWFGIAGNNREVSKRVNTFYV
PNNWITLSTEQAAKLQKNVKKNQAQMKADAEKYVKAKVTATVKSTMAAALKKNPTMSASDQKKLMADTTAKASKQYAAQY
QAQMMQKMIEEAKK

Sequences:

>Translated_254_residues
MIIFLLIIAVIATFLSMTLISKTAVRVICSAISAIVVIASVALMVMNDREHFGMHKITETTTQEIYSVSPSKQMSMLLYK
SIGTADKDRVYIYNKTTSQKKPSHTETDKTTNKVKTTKKSTARLVKSTTRWTYKNNTYKFWFGIAGNNREVSKRVNTFYV
PNNWITLSTEQAAKLQKNVKKNQAQMKADAEKYVKAKVTATVKSTMAAALKKNPTMSASDQKKLMADTTAKASKQYAAQY
QAQMMQKMIEEAKK
>Mature_254_residues
MIIFLLIIAVIATFLSMTLISKTAVRVICSAISAIVVIASVALMVMNDREHFGMHKITETTTQEIYSVSPSKQMSMLLYK
SIGTADKDRVYIYNKTTSQKKPSHTETDKTTNKVKTTKKSTARLVKSTTRWTYKNNTYKFWFGIAGNNREVSKRVNTFYV
PNNWITLSTEQAAKLQKNVKKNQAQMKADAEKYVKAKVTATVKSTMAAALKKNPTMSASDQKKLMADTTAKASKQYAAQY
QAQMMQKMIEEAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28587; Mature: 28587

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIFLLIIAVIATFLSMTLISKTAVRVICSAISAIVVIASVALMVMNDREHFGMHKITET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHH
TTQEIYSVSPSKQMSMLLYKSIGTADKDRVYIYNKTTSQKKPSHTETDKTTNKVKTTKKS
HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
TARLVKSTTRWTYKNNTYKFWFGIAGNNREVSKRVNTFYVPNNWITLSTEQAAKLQKNVK
HHHHHHHHHCEEEECCCEEEEEEECCCCHHHHHHCCEEECCCCEEEECHHHHHHHHHHHH
KNQAQMKADAEKYVKAKVTATVKSTMAAALKKNPTMSASDQKKLMADTTAKASKQYAAQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QAQMMQKMIEEAKK
HHHHHHHHHHHHCC
>Mature Secondary Structure
MIIFLLIIAVIATFLSMTLISKTAVRVICSAISAIVVIASVALMVMNDREHFGMHKITET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHH
TTQEIYSVSPSKQMSMLLYKSIGTADKDRVYIYNKTTSQKKPSHTETDKTTNKVKTTKKS
HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
TARLVKSTTRWTYKNNTYKFWFGIAGNNREVSKRVNTFYVPNNWITLSTEQAAKLQKNVK
HHHHHHHHHCEEEECCCEEEEEEECCCCHHHHHHCCEEECCCCEEEECHHHHHHHHHHHH
KNQAQMKADAEKYVKAKVTATVKSTMAAALKKNPTMSASDQKKLMADTTAKASKQYAAQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QAQMMQKMIEEAKK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA