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The map label for this gene is lemA [H]

Identifier: 116493293

GI number: 116493293

Start: 1534358

End: 1534939

Strand: Reverse

Name: lemA [H]

Synonym: PEPE_1565

Alternate gene names: 116493293

Gene position: 1534939-1534358 (Counterclockwise)

Preceding gene: 116493294

Following gene: 116493292

Centisome position: 83.77

GC content: 33.85

Gene sequence:

>582_bases
ATGGTAGGAATGATAATAGCACTAATTGTAATTGTGGTGATTGTAATTGCGATCGTCTCAATGTACAACGGCTTGGTAAA
AGCTAGAACCTATACACAGGAATCATGGAGCCAAATTAGCGTTCAAATGAAGCGTCGAAATGATTTGATTCCTAATCTTG
TAAATACGGTTAAGGGATATGCAGCCCATGAAAAAGATACTTTAAGTAAAGTGGTGGCACTTCGTAATCAATTAGTGGAT
CAGACTGATAATTCAGCCCCTTCTACTAAACAACGTGAAGAGATTATGAAAACTTCTAACCAGATTAGTGACTCACTTAA
AAGTATTTTTGCTTTATCTGAAAGTTATCCTGACTTGAAGGCTAACCAAGAATTTACTAAATTAATGGAAGAATTAACTA
ATACAGAAAATAAAATTGCTTATTCTCGTCAACTATATAATTCGAGTGTAGCAAGTTACAACATTAAACTACAATCTTTC
CCTAATAATTTAATTGCTGGGATGGGTGGATTTAAGCCGGTTGATTATCTTCAAGTTCCTGAAGAAGAAACTAAAAACCC
AACCGTTTCATTTGATAAATAA

Upstream 100 bases:

>100_bases
TAATCGTTAAGAAAATTTAGTGTTCAAATTCATATAATTTGCTTGACGAATTTGTTACTATTAATATCATATATAGGAAG
TTTTGAAAGGATGGGATTGA

Downstream 100 bases:

>100_bases
TTAAGAGGTCGATTAATGTTATATCAACAGATTGCAAGTAATAAGCGAAAGACCGTTTATGTGATGATCGGTTTTGCTAT
CTTAGTATTGTTTATTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MVGMIIALIVIVVIVIAIVSMYNGLVKARTYTQESWSQISVQMKRRNDLIPNLVNTVKGYAAHEKDTLSKVVALRNQLVD
QTDNSAPSTKQREEIMKTSNQISDSLKSIFALSESYPDLKANQEFTKLMEELTNTENKIAYSRQLYNSSVASYNIKLQSF
PNNLIAGMGGFKPVDYLQVPEEETKNPTVSFDK

Sequences:

>Translated_193_residues
MVGMIIALIVIVVIVIAIVSMYNGLVKARTYTQESWSQISVQMKRRNDLIPNLVNTVKGYAAHEKDTLSKVVALRNQLVD
QTDNSAPSTKQREEIMKTSNQISDSLKSIFALSESYPDLKANQEFTKLMEELTNTENKIAYSRQLYNSSVASYNIKLQSF
PNNLIAGMGGFKPVDYLQVPEEETKNPTVSFDK
>Mature_193_residues
MVGMIIALIVIVVIVIAIVSMYNGLVKARTYTQESWSQISVQMKRRNDLIPNLVNTVKGYAAHEKDTLSKVVALRNQLVD
QTDNSAPSTKQREEIMKTSNQISDSLKSIFALSESYPDLKANQEFTKLMEELTNTENKIAYSRQLYNSSVASYNIKLQSF
PNNLIAGMGGFKPVDYLQVPEEETKNPTVSFDK

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21688; Mature: 21688

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGMIIALIVIVVIVIAIVSMYNGLVKARTYTQESWSQISVQMKRRNDLIPNLVNTVKGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AAHEKDTLSKVVALRNQLVDQTDNSAPSTKQREEIMKTSNQISDSLKSIFALSESYPDLK
HCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ANQEFTKLMEELTNTENKIAYSRQLYNSSVASYNIKLQSFPNNLIAGMGGFKPVDYLQVP
CCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHCCCCCCCCCCCCCC
EEETKNPTVSFDK
HHHCCCCCCCCCC
>Mature Secondary Structure
MVGMIIALIVIVVIVIAIVSMYNGLVKARTYTQESWSQISVQMKRRNDLIPNLVNTVKGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AAHEKDTLSKVVALRNQLVDQTDNSAPSTKQREEIMKTSNQISDSLKSIFALSESYPDLK
HCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ANQEFTKLMEELTNTENKIAYSRQLYNSSVASYNIKLQSFPNNLIAGMGGFKPVDYLQVP
CCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHCCCCCCCCCCCCCC
EEETKNPTVSFDK
HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]