| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is yexA [H]
Identifier: 116493202
GI number: 116493202
Start: 1439141
End: 1439395
Strand: Reverse
Name: yexA [H]
Synonym: PEPE_1464
Alternate gene names: 116493202
Gene position: 1439395-1439141 (Counterclockwise)
Preceding gene: 116493203
Following gene: 116493201
Centisome position: 78.55
GC content: 33.33
Gene sequence:
>255_bases ATGGATAACGCCAAAATTTACGTTACTTACAAAGAATCGATCTTAGATCCCCAAGGAGAAGCAATTAAAACAGCGTTACA TCGATTAAACTACGAAAATGTTAAAGCTGTAACTGTCGGAAAATATTTTGAAATAAAAATTGAAGATCATGGTCAAAATA TTGAAGAGCAAGTTAGAAAAATGAGTGATGAGCTACTAGCAAACATTAACATGGAAACTTATCGATTTGAGATTAGCAGG ATTGAGGAGGACTAG
Upstream 100 bases:
>100_bases GAATCACTTGATAAAGATGTTTTTCGTAAAAAAACTGGAGATTTAGTGACCGTCTATCAGGAAGTTTTAAATCGCTTGAA TAATTCACAGGAGGAAGTTC
Downstream 100 bases:
>100_bases CAATGATTTACAGCATTATTCGTTTTCCAGGGTCTAATTGTGATTGGGATATGTACTATGTTTTGCGCGACGTTATGAAC GTTGAGCCTCAATTTGTGGA
Product: phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MDNAKIYVTYKESILDPQGEAIKTALHRLNYENVKAVTVGKYFEIKIEDHGQNIEEQVRKMSDELLANINMETYRFEISR IEED
Sequences:
>Translated_84_residues MDNAKIYVTYKESILDPQGEAIKTALHRLNYENVKAVTVGKYFEIKIEDHGQNIEEQVRKMSDELLANINMETYRFEISR IEED >Mature_84_residues MDNAKIYVTYKESILDPQGEAIKTALHRLNYENVKAVTVGKYFEIKIEDHGQNIEEQVRKMSDELLANINMETYRFEISR IEED
Specific function: Unknown
COG id: COG1828
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0062 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003850 - ProDom: PD010362 [H]
Pfam domain/function: PF02700 PurS [H]
EC number: NA
Molecular weight: Translated: 9881; Mature: 9881
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNAKIYVTYKESILDPQGEAIKTALHRLNYENVKAVTVGKYFEIKIEDHGQNIEEQVRK CCCCEEEEEEHHHCCCCCCHHHHHHHHHCCCCCEEEEEECEEEEEEECCCCCCHHHHHHH MSDELLANINMETYRFEISRIEED HHHHHHHCCCCHHEEEEEEEECCC >Mature Secondary Structure MDNAKIYVTYKESILDPQGEAIKTALHRLNYENVKAVTVGKYFEIKIEDHGQNIEEQVRK CCCCEEEEEEHHHCCCCCCHHHHHHHHHCCCCCEEEEEECEEEEEEECCCCCCHHHHHHH MSDELLANINMETYRFEISRIEED HHHHHHHCCCCHHEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]