| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is purQ [H]
Identifier: 116493201
GI number: 116493201
Start: 1438464
End: 1439138
Strand: Reverse
Name: purQ [H]
Synonym: PEPE_1463
Alternate gene names: 116493201
Gene position: 1439138-1438464 (Counterclockwise)
Preceding gene: 116493202
Following gene: 116493200
Centisome position: 78.54
GC content: 40.0
Gene sequence:
>675_bases ATGATTTACAGCATTATTCGTTTTCCAGGGTCTAATTGTGATTGGGATATGTACTATGTTTTGCGCGACGTTATGAACGT TGAGCCTCAATTTGTGGACTATCGCGAAAAATCCTTACCGCAAGATACAGTTGCAGTCTTAATTCCAGGCGGTTTTTCAT ATGGTGACTACTTACGAAGCGGCGCAATCGCACGTTTTTCTCCCATCATGGATGCTGTAAAAAAATTTGCCTATGCGGGA AACCCAGTAATTGGAATTTGTAACGGATTTCAAATTTTAACCGAAGCCGGGCTGCTTCCGGGGGCCTTGCGATCGAATGA TAGTTTGAATTTTATTTGTAAACCACAAAAATTAGTGGTTGAAAATAATCAGACTATCTTTACCAAACGTTTTGATTTAA AACAGACCGTAATGTTTCCCATTGCCCATGGTGAAGGTAACTATTATTGTGATTCGGCTACTTTACAAGACTTAAAGGAT CATCATCAAATTGTTTTACGTTATCAAAATAATCCCAACGGAAGTACAGACGATATTGCGGGAATTATCAATCAGAAAGG CAATGTGCTAGGGATGATGCCCCATCCTGAACGCGCTAGTGAAGCCGTCCTAGGTGGCGAAGATGGCAAAATGCTGTTCC AAAGTTTAATTGAAAGCATGACGCAAAATGTTTAA
Upstream 100 bases:
>100_bases ATATTGAAGAGCAAGTTAGAAAAATGAGTGATGAGCTACTAGCAAACATTAACATGGAAACTTATCGATTTGAGATTAGC AGGATTGAGGAGGACTAGCA
Downstream 100 bases:
>100_bases TTAAAGGAGTTTTCGCAATGATGAAGGAATTAACACCTACCGAAATTCGAGATCAAAAATTGTATTTGCAATGGGGGATA AGCGAAGACGAATATCAGAA
Product: phosphoribosylformylglycinamidine synthase domain-containing protein
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase I; FGAM synthase I [H]
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MIYSIIRFPGSNCDWDMYYVLRDVMNVEPQFVDYREKSLPQDTVAVLIPGGFSYGDYLRSGAIARFSPIMDAVKKFAYAG NPVIGICNGFQILTEAGLLPGALRSNDSLNFICKPQKLVVENNQTIFTKRFDLKQTVMFPIAHGEGNYYCDSATLQDLKD HHQIVLRYQNNPNGSTDDIAGIINQKGNVLGMMPHPERASEAVLGGEDGKMLFQSLIESMTQNV
Sequences:
>Translated_224_residues MIYSIIRFPGSNCDWDMYYVLRDVMNVEPQFVDYREKSLPQDTVAVLIPGGFSYGDYLRSGAIARFSPIMDAVKKFAYAG NPVIGICNGFQILTEAGLLPGALRSNDSLNFICKPQKLVVENNQTIFTKRFDLKQTVMFPIAHGEGNYYCDSATLQDLKD HHQIVLRYQNNPNGSTDDIAGIINQKGNVLGMMPHPERASEAVLGGEDGKMLFQSLIESMTQNV >Mature_224_residues MIYSIIRFPGSNCDWDMYYVLRDVMNVEPQFVDYREKSLPQDTVAVLIPGGFSYGDYLRSGAIARFSPIMDAVKKFAYAG NPVIGICNGFQILTEAGLLPGALRSNDSLNFICKPQKLVVENNQTIFTKRFDLKQTVMFPIAHGEGNYYCDSATLQDLKD HHQIVLRYQNNPNGSTDDIAGIINQKGNVLGMMPHPERASEAVLGGEDGKMLFQSLIESMTQNV
Specific function: Unknown
COG id: COG0047
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI48994899, Length=213, Percent_Identity=28.6384976525822, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17553022, Length=231, Percent_Identity=28.1385281385281, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582111, Length=235, Percent_Identity=30.2127659574468, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582109, Length=235, Percent_Identity=30.2127659574468, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI17137292, Length=235, Percent_Identity=30.2127659574468, Blast_Score=76, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010075 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 24984; Mature: 24984
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYSIIRFPGSNCDWDMYYVLRDVMNVEPQFVDYREKSLPQDTVAVLIPGGFSYGDYLRS CEEEEEECCCCCCCCHHHHHHHHHHCCCCHHCCCHHHCCCCCEEEEEECCCCCHHHHHHC GAIARFSPIMDAVKKFAYAGNPVIGICNGFQILTEAGLLPGALRSNDSLNFICKPQKLVV CCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCCCCCEEEEECCCEEEE ENNQTIFTKRFDLKQTVMFPIAHGEGNYYCDSATLQDLKDHHQIVLRYQNNPNGSTDDIA ECCCEEEEEECCCCEEEEEEEEECCCCEEECCCHHHHHHCCEEEEEEECCCCCCCHHHHH GIINQKGNVLGMMPHPERASEAVLGGEDGKMLFQSLIESMTQNV HHHCCCCCEEEECCCCCCCCHHEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIYSIIRFPGSNCDWDMYYVLRDVMNVEPQFVDYREKSLPQDTVAVLIPGGFSYGDYLRS CEEEEEECCCCCCCCHHHHHHHHHHCCCCHHCCCHHHCCCCCEEEEEECCCCCHHHHHHC GAIARFSPIMDAVKKFAYAGNPVIGICNGFQILTEAGLLPGALRSNDSLNFICKPQKLVV CCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCCCCCEEEEECCCEEEE ENNQTIFTKRFDLKQTVMFPIAHGEGNYYCDSATLQDLKDHHQIVLRYQNNPNGSTDDIA ECCCEEEEEECCCCEEEEEEEEECCCCEEECCCHHHHHHCCEEEEEEECCCCCCCHHHHH GIINQKGNVLGMMPHPERASEAVLGGEDGKMLFQSLIESMTQNV HHHCCCCCEEEECCCCCCCCHHEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA