| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493092
Identifier: 116493092
GI number: 116493092
Start: 1332234
End: 1332563
Strand: Reverse
Name: 116493092
Synonym: PEPE_1346
Alternate gene names: NA
Gene position: 1332563-1332234 (Counterclockwise)
Preceding gene: 116493093
Following gene: 116493091
Centisome position: 72.72
GC content: 34.24
Gene sequence:
>330_bases ATGGGCAACAAAGATCATGAAAAACGTTTTTTGCTTCGTTTAGATCAAAAACTTTATGAAAGACTTCAATCGGAAGCGGA TGAACAAGGACGAAGTGTTAATGCACATATCGTTAATATCTTAAATAGAACTAACACGCCAGCGACCTTTGAGAAACGCC AAATTATTGGAAAAGTCATTGCAGGTAAAGATTTAAGTCAGAGTGGACTAGTATTAGTTTCAGGAATTTATTACAGATAT TTACTTGATGATAATGGTAATGTGGTCGAAGACGCCCAATATGCCATCATTGAAGCAAATGGAAATATCTTAACTTTAAG AAGAATATAG
Upstream 100 bases:
>100_bases AATAAGGGATCATTTTTTTATTGACAGAAGTAATATCTAAGACTACACTTTAACCATAATATATTAATGATATTGTTTTG ATATCACGAAAGGAGTTAAG
Downstream 100 bases:
>100_bases GGGGAATATTTGATGTTAGGTATTAAAATCGTTCCGCAAAATAACCAGGGTTTAGTTGAGACGTTAGGAAAGTATAGTCA TAGTGTAGAATCAGGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MGNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVIAGKDLSQSGLVLVSGIYYRY LLDDNGNVVEDAQYAIIEANGNILTLRRI
Sequences:
>Translated_109_residues MGNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVIAGKDLSQSGLVLVSGIYYRY LLDDNGNVVEDAQYAIIEANGNILTLRRI >Mature_108_residues GNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVIAGKDLSQSGLVLVSGIYYRYL LDDNGNVVEDAQYAIIEANGNILTLRRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12401; Mature: 12270
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCCCCHHHHHHHHHHH AGKDLSQSGLVLVSGIYYRYLLDDNGNVVEDAQYAIIEANGNILTLRRI CCCCCCCCCEEEEEEEEEEEEECCCCCEECCCEEEEEECCCCEEEEEEC >Mature Secondary Structure GNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCCCCHHHHHHHHHHH AGKDLSQSGLVLVSGIYYRYLLDDNGNVVEDAQYAIIEANGNILTLRRI CCCCCCCCCEEEEEEEEEEEEECCCCCEECCCEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA