| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492977
Identifier: 116492977
GI number: 116492977
Start: 1218949
End: 1219557
Strand: Reverse
Name: 116492977
Synonym: PEPE_1229
Alternate gene names: NA
Gene position: 1219557-1218949 (Counterclockwise)
Preceding gene: 116492978
Following gene: 116492976
Centisome position: 66.56
GC content: 32.02
Gene sequence:
>609_bases TTGAAATTTTTCACCTCGGATACACACTTTTTTCATAAAGAATTGTTAAAAGATAAAGACTTTGCTCCACGCGATTTTGA CAATATCGAAGATATGCATGCAGCAATCATTAAAAATTGGAATGATCGAGTGACCGATCGGGATACGGTGTATCACTTAG GGGATGTGGCTTTGAATTTTGTGAGACCTGAAAAAAGGGCTAACGAACAAATATTCAGATTATTGAATTCTTTAAATGGT CACATTGTTTTAATTAAAGGGAACCATGACGCACGAAGTTTATTCAAATATCTTCAAGCTAATAATTATTTGTTAAATGG ACAATCTAAATTTCAATTTCATGATGTGGGTACTATCATTAAGATGAATCATCGCCAATTAATAATGAGTCATTATCCGA TAATGTTAGGAATTGTAAAACAGGTAATTAATTTACATGGTCATATCCACCATTACAGCGTAAATATTAAGGAAAATATT AATGTGGGTGTGGATACTCCTGAAAAAGATTATTTAGATTATGCGATTCCATTTGGAGCGCCATTTTCAGAATCTGACAT AGAACAAATCATCAATGGTAAGAAAATTGATTTTCAAAAAAGGAAGTAG
Upstream 100 bases:
>100_bases TATTGCAAAAGGAAACAGCGATTGCTTTAATTGGATCATTAATTTGGTTCGGTGTAATGTTTACGGTAGCGAAAATTAAG GGAAAAGGGGAGCTAATGGA
Downstream 100 bases:
>100_bases GCGTTGACCTTTCTTCTTTTTTTATTTAGGATAAGTTTTATATTGATGAGTGGAGAATTTAGATGAGTAAGAAAACAAAT GAAGAATTATCTGAAATGAG
Product: phosphoesterase or phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNFVRPEKRANEQIFRLLNSLNG HIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTIIKMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENI NVGVDTPEKDYLDYAIPFGAPFSESDIEQIINGKKIDFQKRK
Sequences:
>Translated_202_residues MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNFVRPEKRANEQIFRLLNSLNG HIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTIIKMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENI NVGVDTPEKDYLDYAIPFGAPFSESDIEQIINGKKIDFQKRK >Mature_202_residues MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNFVRPEKRANEQIFRLLNSLNG HIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTIIKMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENI NVGVDTPEKDYLDYAIPFGAPFSESDIEQIINGKKIDFQKRK
Specific function: Unknown
COG id: COG4186
COG function: function code R; Predicted phosphoesterase or phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 23645; Mature: 23645
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNF CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VRPEKRANEQIFRLLNSLNGHIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTII CCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCCEEEECCCEEE KMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENINVGVDTPEKDYLDYAIPFGA EECHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEECCCEECCCCCCCCCCEEECCCCC PFSESDIEQIINGKKIDFQKRK CCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNF CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VRPEKRANEQIFRLLNSLNGHIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTII CCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCCEEEECCCEEE KMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENINVGVDTPEKDYLDYAIPFGA EECHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEECCCEECCCCCCCCCCEEECCCCC PFSESDIEQIINGKKIDFQKRK CCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]