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The map label for this gene is 116492931

Identifier: 116492931

GI number: 116492931

Start: 1171249

End: 1171899

Strand: Reverse

Name: 116492931

Synonym: PEPE_1170

Alternate gene names: NA

Gene position: 1171899-1171249 (Counterclockwise)

Preceding gene: 116492932

Following gene: 116492930

Centisome position: 63.95

GC content: 32.1

Gene sequence:

>651_bases
ATGACTGAAGATAAGAAAAAACAAGATATAGTTAAAGATTTGATTGATAAAATCGATCAAAATCCGCAAGAAGCTGAAAA
TTATTATGCGTTAGCTACGGTTTTGGTTAAGCAACAAAGTTTTGACCAAGCTGAAGAACTTTTAGTAAAAGCTCGAGGTT
TATTTAAAGATTCGCATAGCGTCGATTTATTAACATACGGTTTGGGAAATGTTTATTATGAATCTGGACTCTATGAGAAG
GCTAATGTAGAATTTCAAACTATTAAAGATGCACATCTAAAAAAAGATGCTAATTTAATGATTGCTCAGGGTTACTATGC
TCAAAGTCAGTACAAATTAGCTTTTGCTTTTGGACTAACTGCGTTAGAACAGAATCCCCACGATGCTGATACAAATGAAT
TAATGGGTGATGTTAATTTAGCCCTAGGGGATGCTCCAAGGGCCCAAAAGTATTATGATGCGGCGTTAGAAAATAAAAAT
ACAGCTAAGTTACTATTTAACCGTGGCGTAGTTGAAATGACGTTAACTAAAAAGAAAACAAACATTTATTTTGAACAAGC
AAAAAAAATTGATAAAACGTATTTTGAAAGTAGCAAACAACGATTAATTGATATCGATAAATTACTAAGTGAATCTAAGG
AAGATGTTTAA

Upstream 100 bases:

>100_bases
AATGACTTAGGAAAGTCTTTTGAATTAGTTGATTGGAATAATACTAGTTACTTAAAGAAGCGCATTGACCCAACAGATGT
AATTTAATGTAGGTGAAAAA

Downstream 100 bases:

>100_bases
TGGCATTTGAGAAAATGAATTTATTTGGCGATGCTGACCCAAAAAAGCAGTCTCAAAATAAGATGGTCGAACTGATTGGT
GAAATTAGTGCGGTCTTTTT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR 2 Repeat Protein; TPR Repeats Containing Protein; TPR Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; Tpr Repeat Protein

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTEDKKKQDIVKDLIDKIDQNPQEAENYYALATVLVKQQSFDQAEELLVKARGLFKDSHSVDLLTYGLGNVYYESGLYEK
ANVEFQTIKDAHLKKDANLMIAQGYYAQSQYKLAFAFGLTALEQNPHDADTNELMGDVNLALGDAPRAQKYYDAALENKN
TAKLLFNRGVVEMTLTKKKTNIYFEQAKKIDKTYFESSKQRLIDIDKLLSESKEDV

Sequences:

>Translated_216_residues
MTEDKKKQDIVKDLIDKIDQNPQEAENYYALATVLVKQQSFDQAEELLVKARGLFKDSHSVDLLTYGLGNVYYESGLYEK
ANVEFQTIKDAHLKKDANLMIAQGYYAQSQYKLAFAFGLTALEQNPHDADTNELMGDVNLALGDAPRAQKYYDAALENKN
TAKLLFNRGVVEMTLTKKKTNIYFEQAKKIDKTYFESSKQRLIDIDKLLSESKEDV
>Mature_215_residues
TEDKKKQDIVKDLIDKIDQNPQEAENYYALATVLVKQQSFDQAEELLVKARGLFKDSHSVDLLTYGLGNVYYESGLYEKA
NVEFQTIKDAHLKKDANLMIAQGYYAQSQYKLAFAFGLTALEQNPHDADTNELMGDVNLALGDAPRAQKYYDAALENKNT
AKLLFNRGVVEMTLTKKKTNIYFEQAKKIDKTYFESSKQRLIDIDKLLSESKEDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24629; Mature: 24498

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDKKKQDIVKDLIDKIDQNPQEAENYYALATVLVKQQSFDQAEELLVKARGLFKDSHS
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
VDLLTYGLGNVYYESGLYEKANVEFQTIKDAHLKKDANLMIAQGYYAQSQYKLAFAFGLT
EEEEEECCCHHHHHCCCCCCCCCCCEEHHHHHHCCCCCEEEECCCCCCCCEEEHHHHHHH
ALEQNPHDADTNELMGDVNLALGDAPRAQKYYDAALENKNTAKLLFNRGVVEMTLTKKKT
HHCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHCCCCHHHHEECCCEEEEEEECCHH
NIYFEQAKKIDKTYFESSKQRLIDIDKLLSESKEDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TEDKKKQDIVKDLIDKIDQNPQEAENYYALATVLVKQQSFDQAEELLVKARGLFKDSHS
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
VDLLTYGLGNVYYESGLYEKANVEFQTIKDAHLKKDANLMIAQGYYAQSQYKLAFAFGLT
EEEEEECCCHHHHHCCCCCCCCCCCEEHHHHHHCCCCCEEEECCCCCCCCEEEHHHHHHH
ALEQNPHDADTNELMGDVNLALGDAPRAQKYYDAALENKNTAKLLFNRGVVEMTLTKKKT
HHCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHCCCCHHHHEECCCEEEEEEECCHH
NIYFEQAKKIDKTYFESSKQRLIDIDKLLSESKEDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA