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The map label for this gene is ypjC [H]

Identifier: 116492836

GI number: 116492836

Start: 1070578

End: 1071462

Strand: Direct

Name: ypjC [H]

Synonym: PEPE_1073

Alternate gene names: 116492836

Gene position: 1070578-1071462 (Clockwise)

Preceding gene: 116492822

Following gene: 116492853

Centisome position: 58.43

GC content: 40.79

Gene sequence:

>885_bases
ATGCAAAAAGATGAATCAATCCGATTTTTAGATTTTGTGATGATTGCCTTAGGTTGTTGTCTGTATGGTTTAGGGTTGGC
TGTAGTCAATATCCCTAATAATCTAGCTGAAGGTGGAATTACAGGGGTCACCTTAATTTTACGAGCTTTATTAGGAATTG
ATCCTGCACTCTCAACAATTTTAATTAATATCCCATTAATTTTCATAGGTTACCGTTTTCTGGGAAAAAGATCTTTAATC
TACACAATTTTTGGGACGTTTGCGCTCTCGTTTTGGTTATACGTTTGGCAACGAGTACCCATCAGTCTCGATATTCATCA
TGATATGTTTATCGCCGGAATCCTGGCCGGAATCGCTGGTGGTTTTGGTAGCGGGATCGTTTACCGTTTCGGTGGTACAA
CCGGTGGAACCGACGTTGTAGCTCGCATTCTCGAGAAACGGCGTGGAATTGCCATGGGTCATACTCTTTTCGCTTTAGAT
GCCGTCGTATTAACCATTTCTCTTTGCTACATCGATGTCCTTCATATGATGTATACTCTACTAGCAGCTTATGTATTTTC
TCGTCTAGTTTCTCTTACACAGGTGGGAGCCTATGCTGCTCATGGTTTACTAATTGTCAGTAGCAAAAACCAAGAGATTG
CTGATGCCTTAATGGACGAGTTAGAGCGCGGGGCAAGCTATATTCATATGTCTGGTGCCTATTCTAAAACAGAGCGTGAA
ATGGTTTATTGCGTAATTGGACCTAACGAATTAAACGTTGCTAAACGTATCATTGGACGAATTGATCCTCAGGCGTTTAC
TTCTATTATTGATGTCCATGAAGCCATTGGTGAAGGTTTTACCTACGATTCGCCCAGTGCTAAAAATCGAAATATCCCTA
ATTAA

Upstream 100 bases:

>100_bases
GTCTTAATAATTCTACCAGCGTATGATTTTTTTGAAAAGCCTGCTCCGCTCTATGGTATGATATTTGCAAGTACTTCAGT
TTCTACGTAGGAGGTCTATT

Downstream 100 bases:

>100_bases
AAAACATCAGTTATGTATAAACTTAAATACATGACTGATGTTTTTTAATTAGCTTTAGAATACTGTTAAATCAGAATATA
CCGGCTTTAACAAATTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MQKDESIRFLDFVMIALGCCLYGLGLAVVNIPNNLAEGGITGVTLILRALLGIDPALSTILINIPLIFIGYRFLGKRSLI
YTIFGTFALSFWLYVWQRVPISLDIHHDMFIAGILAGIAGGFGSGIVYRFGGTTGGTDVVARILEKRRGIAMGHTLFALD
AVVLTISLCYIDVLHMMYTLLAAYVFSRLVSLTQVGAYAAHGLLIVSSKNQEIADALMDELERGASYIHMSGAYSKTERE
MVYCVIGPNELNVAKRIIGRIDPQAFTSIIDVHEAIGEGFTYDSPSAKNRNIPN

Sequences:

>Translated_294_residues
MQKDESIRFLDFVMIALGCCLYGLGLAVVNIPNNLAEGGITGVTLILRALLGIDPALSTILINIPLIFIGYRFLGKRSLI
YTIFGTFALSFWLYVWQRVPISLDIHHDMFIAGILAGIAGGFGSGIVYRFGGTTGGTDVVARILEKRRGIAMGHTLFALD
AVVLTISLCYIDVLHMMYTLLAAYVFSRLVSLTQVGAYAAHGLLIVSSKNQEIADALMDELERGASYIHMSGAYSKTERE
MVYCVIGPNELNVAKRIIGRIDPQAFTSIIDVHEAIGEGFTYDSPSAKNRNIPN
>Mature_294_residues
MQKDESIRFLDFVMIALGCCLYGLGLAVVNIPNNLAEGGITGVTLILRALLGIDPALSTILINIPLIFIGYRFLGKRSLI
YTIFGTFALSFWLYVWQRVPISLDIHHDMFIAGILAGIAGGFGSGIVYRFGGTTGGTDVVARILEKRRGIAMGHTLFALD
AVVLTISLCYIDVLHMMYTLLAAYVFSRLVSLTQVGAYAAHGLLIVSSKNQEIADALMDELERGASYIHMSGAYSKTERE
MVYCVIGPNELNVAKRIIGRIDPQAFTSIIDVHEAIGEGFTYDSPSAKNRNIPN

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 32075; Mature: 32075

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDESIRFLDFVMIALGCCLYGLGLAVVNIPNNLAEGGITGVTLILRALLGIDPALSTI
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHCCHHHHHHHHHHHHCCCHHHHHH
LINIPLIFIGYRFLGKRSLIYTIFGTFALSFWLYVWQRVPISLDIHHDMFIAGILAGIAG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHC
GFGSGIVYRFGGTTGGTDVVARILEKRRGIAMGHTLFALDAVVLTISLCYIDVLHMMYTL
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAYVFSRLVSLTQVGAYAAHGLLIVSSKNQEIADALMDELERGASYIHMSGAYSKTERE
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCE
MVYCVIGPNELNVAKRIIGRIDPQAFTSIIDVHEAIGEGFTYDSPSAKNRNIPN
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKDESIRFLDFVMIALGCCLYGLGLAVVNIPNNLAEGGITGVTLILRALLGIDPALSTI
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHCCHHHHHHHHHHHHCCCHHHHHH
LINIPLIFIGYRFLGKRSLIYTIFGTFALSFWLYVWQRVPISLDIHHDMFIAGILAGIAG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHC
GFGSGIVYRFGGTTGGTDVVARILEKRRGIAMGHTLFALDAVVLTISLCYIDVLHMMYTL
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAYVFSRLVSLTQVGAYAAHGLLIVSSKNQEIADALMDELERGASYIHMSGAYSKTERE
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCE
MVYCVIGPNELNVAKRIIGRIDPQAFTSIIDVHEAIGEGFTYDSPSAKNRNIPN
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]