| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is mro [H]
Identifier: 116492822
GI number: 116492822
Start: 1055975
End: 1057000
Strand: Direct
Name: mro [H]
Synonym: PEPE_1059
Alternate gene names: 116492822
Gene position: 1055975-1057000 (Clockwise)
Preceding gene: 116492821
Following gene: 116492836
Centisome position: 57.63
GC content: 31.19
Gene sequence:
>1026_bases ATGAAACATACTTTAGTTAATAAATACCAAACACTAGATGATAAAAATTACTATCGTATTTCTATGTTTAATAAAAATGG TGTTCAAGTTGATATTTTAAATTATGGTGCAACTCTTGAACATTTTTTTGTACCTGGTCGAACATCTGAAAAGGACAACA TTATTTTAAGTTTAGAACGCCCAGAATATTATGATAAAGAACGGAATTATCTCGGTGGTACTGTTGGTAGAGTTATTGGT AGAATTGCACATGGTCACTGGCAAGATGAAGATAACACAATACAATTTGAATTAAATGATGACCCTAATCATGCACATGG GGGATCAAAAGGATTCGATACGCAAGTATTCGGCTTTACTATTAAAGAAAATGAAAACTGTAGTATCCTTAAATTACATC TATTAGATCCGGATAATTATAATAACTATCCTGGGAATTTAAGCATTTATGTAACTTACACGTTAACAAACGAAAATACA TTAATTTATGAAATAGAAGCTATTTCAGATAAAAAAACTTTATGTAATCCAGCAAATCATAGCTATTTTAATCTAAATAG CGGTAAAGATATACTAGACCAATATCTAACTTTAGATGCTGACTATTATTTACCACTGGACAAAAATAGTATTCCAACCG GCGAACAAAAATCAGTCACTAATACTCCATTTGATTTTCGAAAACCCAAATTACTTGGTAAAGCAATTACTTCTTTAGAT TCACAAATAAGAGAACAATTAGGACTTAATCATCCTTTCTTGCTCAACCGAAATAATAATATTGCAGCAGTATTAGAAAG CTTAGATCATCAGCGTAGATTGAGTGTGGAAACAACTGCCCCATCAATTGTTGTTTATACTGGTAACCATTTTAATAATA GTGGATTTGCACAGAATATTGGCCAATATGGTGGAGTTGCTTTAGAGACCCAATTTCCACCAAGTAATGATGAATCTTTG TCTTCAATTGTGTTGCTACCATATCAAAAATTTTATAGTCGAACTAGTTGGTGTATAGAATTTTGA
Upstream 100 bases:
>100_bases TAATCATCAAGGGATGCTCAGACACTGTTCGTTCAAAAAATTTAGTTTATAATATAAAAGCACTCATGTGAGTGCTTTTA TTAATTGGAGGAATTTCGAA
Downstream 100 bases:
>100_bases TGTCTTAATTAATCGTATTCCATATAAAATAAGAGTTGAATTTCTGAATAAACTACAGAAATCCAACTCTTATTTTTAGT ACAACCGTGTGTCTTTCATT
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKHTLVNKYQTLDDKNYYRISMFNKNGVQVDILNYGATLEHFFVPGRTSEKDNIILSLERPEYYDKERNYLGGTVGRVIG RIAHGHWQDEDNTIQFELNDDPNHAHGGSKGFDTQVFGFTIKENENCSILKLHLLDPDNYNNYPGNLSIYVTYTLTNENT LIYEIEAISDKKTLCNPANHSYFNLNSGKDILDQYLTLDADYYLPLDKNSIPTGEQKSVTNTPFDFRKPKLLGKAITSLD SQIREQLGLNHPFLLNRNNNIAAVLESLDHQRRLSVETTAPSIVVYTGNHFNNSGFAQNIGQYGGVALETQFPPSNDESL SSIVLLPYQKFYSRTSWCIEF
Sequences:
>Translated_341_residues MKHTLVNKYQTLDDKNYYRISMFNKNGVQVDILNYGATLEHFFVPGRTSEKDNIILSLERPEYYDKERNYLGGTVGRVIG RIAHGHWQDEDNTIQFELNDDPNHAHGGSKGFDTQVFGFTIKENENCSILKLHLLDPDNYNNYPGNLSIYVTYTLTNENT LIYEIEAISDKKTLCNPANHSYFNLNSGKDILDQYLTLDADYYLPLDKNSIPTGEQKSVTNTPFDFRKPKLLGKAITSLD SQIREQLGLNHPFLLNRNNNIAAVLESLDHQRRLSVETTAPSIVVYTGNHFNNSGFAQNIGQYGGVALETQFPPSNDESL SSIVLLPYQKFYSRTSWCIEF >Mature_341_residues MKHTLVNKYQTLDDKNYYRISMFNKNGVQVDILNYGATLEHFFVPGRTSEKDNIILSLERPEYYDKERNYLGGTVGRVIG RIAHGHWQDEDNTIQFELNDDPNHAHGGSKGFDTQVFGFTIKENENCSILKLHLLDPDNYNNYPGNLSIYVTYTLTNENT LIYEIEAISDKKTLCNPANHSYFNLNSGKDILDQYLTLDADYYLPLDKNSIPTGEQKSVTNTPFDFRKPKLLGKAITSLD SQIREQLGLNHPFLLNRNNNIAAVLESLDHQRRLSVETTAPSIVVYTGNHFNNSGFAQNIGQYGGVALETQFPPSNDESL SSIVLLPYQKFYSRTSWCIEF
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=318, Percent_Identity=33.0188679245283, Blast_Score=160, Evalue=2e-39, Organism=Escherichia coli, GI1786971, Length=308, Percent_Identity=32.1428571428571, Blast_Score=154, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17557428, Length=299, Percent_Identity=26.4214046822742, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI115533334, Length=299, Percent_Identity=26.4214046822742, Blast_Score=111, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6322004, Length=318, Percent_Identity=28.3018867924528, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319493, Length=290, Percent_Identity=25.5172413793103, Blast_Score=80, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6324399, Length=320, Percent_Identity=26.5625, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24668278, Length=329, Percent_Identity=29.483282674772, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24583720, Length=326, Percent_Identity=27.3006134969325, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24668282, Length=334, Percent_Identity=27.5449101796407, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24659048, Length=332, Percent_Identity=28.9156626506024, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24641876, Length=284, Percent_Identity=26.4084507042254, Blast_Score=102, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 38873; Mature: 38873
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHTLVNKYQTLDDKNYYRISMFNKNGVQVDILNYGATLEHFFVPGRTSEKDNIILSLER CCCCCCCHHHCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEECC PEYYDKERNYLGGTVGRVIGRIAHGHWQDEDNTIQFELNDDPNHAHGGSKGFDTQVFGFT CCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE IKENENCSILKLHLLDPDNYNNYPGNLSIYVTYTLTNENTLIYEIEAISDKKTLCNPANH EECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEEEEEECCCCCHHCCCCCC SYFNLNSGKDILDQYLTLDADYYLPLDKNSIPTGEQKSVTNTPFDFRKPKLLGKAITSLD CEEEECCCHHHHHHHHEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SQIREQLGLNHPFLLNRNNNIAAVLESLDHQRRLSVETTAPSIVVYTGNHFNNSGFAQNI HHHHHHHCCCCCEEEECCCCHHHHHHHHCHHHEEEEEECCCEEEEEECCCCCCCCHHHHH GQYGGVALETQFPPSNDESLSSIVLLPYQKFYSRTSWCIEF HHHCCEEEEECCCCCCCCCCEEEEEEECHHHCCCCCEEEEC >Mature Secondary Structure MKHTLVNKYQTLDDKNYYRISMFNKNGVQVDILNYGATLEHFFVPGRTSEKDNIILSLER CCCCCCCHHHCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEECC PEYYDKERNYLGGTVGRVIGRIAHGHWQDEDNTIQFELNDDPNHAHGGSKGFDTQVFGFT CCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE IKENENCSILKLHLLDPDNYNNYPGNLSIYVTYTLTNENTLIYEIEAISDKKTLCNPANH EECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEEEEEECCCCCHHCCCCCC SYFNLNSGKDILDQYLTLDADYYLPLDKNSIPTGEQKSVTNTPFDFRKPKLLGKAITSLD CEEEECCCHHHHHHHHEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SQIREQLGLNHPFLLNRNNNIAAVLESLDHQRRLSVETTAPSIVVYTGNHFNNSGFAQNI HHHHHHHCCCCCEEEECCCCHHHHHHHHCHHHEEEEEECCCEEEEEECCCCCCCCHHHHH GQYGGVALETQFPPSNDESLSSIVLLPYQKFYSRTSWCIEF HHHCCEEEEECCCCCCCCCCEEEEEEECHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3012466; 3531172 [H]