| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is yhaI [C]
Identifier: 116492853
GI number: 116492853
Start: 1085993
End: 1086358
Strand: Direct
Name: yhaI [C]
Synonym: PEPE_1091
Alternate gene names: 116492853
Gene position: 1085993-1086358 (Clockwise)
Preceding gene: 116492836
Following gene: 116492857
Centisome position: 59.27
GC content: 34.7
Gene sequence:
>366_bases ATGGTTGAATCATATAAAAAATTCTGGCATAATATCACCAATTTTTCAGGTACTGCCAATCGTCCCGACTACTGGTGGCC AGTTATTATCAATTATATTTTAGGTGTAATCATCATCGCAATTATCCAATCTATTACTGGTCATCCTATTGAAGACATCT ACAATCTAAGTGATTTGAATATTAATCTAGTTTCTAAAATCATTGCATTCATCGTTTGGCTGGGTATGTGGACACTTAAA GTAAGACGTTTACATGACACCGATCGAAGTGGCTGGTGGATTTTAATTGAAATCATCCCACTAATCGGTACAATCTGGTT CTTTATTTTAATGATCTTGCCTTCTAAGGAAAATCGTTGGAGTTAA
Upstream 100 bases:
>100_bases TTTTGACTACCTTTGCTATACTAAAATGTAATAAAAACTACATTATGACTAAATACTGAAGTCTTTAAAAGCTGTTTATT GCATTGGAGGTGACATATTG
Downstream 100 bases:
>100_bases GATCCATAATTGAATTTATAATTTGTTTTAACTAAAAAGGGATACTACTAATTTCATTACTTTAGTAGTATCCCTTTTTA GTTAAATCTAGAACCCTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MVESYKKFWHNITNFSGTANRPDYWWPVIINYILGVIIIAIIQSITGHPIEDIYNLSDLNINLVSKIIAFIVWLGMWTLK VRRLHDTDRSGWWILIEIIPLIGTIWFFILMILPSKENRWS
Sequences:
>Translated_121_residues MVESYKKFWHNITNFSGTANRPDYWWPVIINYILGVIIIAIIQSITGHPIEDIYNLSDLNINLVSKIIAFIVWLGMWTLK VRRLHDTDRSGWWILIEIIPLIGTIWFFILMILPSKENRWS >Mature_121_residues MVESYKKFWHNITNFSGTANRPDYWWPVIINYILGVIIIAIIQSITGHPIEDIYNLSDLNINLVSKIIAFIVWLGMWTLK VRRLHDTDRSGWWILIEIIPLIGTIWFFILMILPSKENRWS
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789491, Length=121, Percent_Identity=35.5371900826446, Blast_Score=62, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14342; Mature: 14342
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESYKKFWHNITNFSGTANRPDYWWPVIINYILGVIIIAIIQSITGHPIEDIYNLSDLN CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC INLVSKIIAFIVWLGMWTLKVRRLHDTDRSGWWILIEIIPLIGTIWFFILMILPSKENRW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC S C >Mature Secondary Structure MVESYKKFWHNITNFSGTANRPDYWWPVIINYILGVIIIAIIQSITGHPIEDIYNLSDLN CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC INLVSKIIAFIVWLGMWTLKVRRLHDTDRSGWWILIEIIPLIGTIWFFILMILPSKENRW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA