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The map label for this gene is yhbQ [C]

Identifier: 116492641

GI number: 116492641

Start: 874791

End: 875078

Strand: Direct

Name: yhbQ [C]

Synonym: PEPE_0875

Alternate gene names: 116492641

Gene position: 874791-875078 (Clockwise)

Preceding gene: 116492640

Following gene: 116492642

Centisome position: 47.74

GC content: 32.64

Gene sequence:

>288_bases
ATGGAAATTCCACTGATTAACGGATTTTATTTTTATGTTTTACGCTGTGCGGATAACACTTTATATGGTGGCTATACCAT
AAATCTTATTAACCGCGTTGAACGCCATAATAAGGGACAAGGTGCCAAATATACTAAGGCTCGAAGACCAGTTCAATTAA
TTTATTTTGAATCGTTTGATAATCAGCATGACGCAATGTCTGCAGAATATCAGTTCAAGCAACGAACGCGAAGTAGTAAA
ATTAAATTTCTTAAAAAGAACGGTATTTCATTAACAAATTTAAAATAA

Upstream 100 bases:

>100_bases
GAAGCGATTAAAGACGGTAAGCCTAATGGAACTAGAATCTTACCACCAATAGTTATTTATGAGGGGTTGGAATACTCTAA
AGCAATTAAGGAGTTATTAT

Downstream 100 bases:

>100_bases
TAGTGGTACAGTTAAGGCGATTAACGACTAATTTAATAGTTTGAATACTGTAATATTTTTTGAATCATGATACAGTATGT
AAAACAAATTATTTAGCCAA

Product: URI-like endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MEIPLINGFYFYVLRCADNTLYGGYTINLINRVERHNKGQGAKYTKARRPVQLIYFESFDNQHDAMSAEYQFKQRTRSSK
IKFLKKNGISLTNLK

Sequences:

>Translated_95_residues
MEIPLINGFYFYVLRCADNTLYGGYTINLINRVERHNKGQGAKYTKARRPVQLIYFESFDNQHDAMSAEYQFKQRTRSSK
IKFLKKNGISLTNLK
>Mature_95_residues
MEIPLINGFYFYVLRCADNTLYGGYTINLINRVERHNKGQGAKYTKARRPVQLIYFESFDNQHDAMSAEYQFKQRTRSSK
IKFLKKNGISLTNLK

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y875_PEDPA (Q03FT8)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804376.1
- ProteinModelPortal:   Q03FT8
- SMR:   Q03FT8
- STRING:   Q03FT8
- GeneID:   4417835
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_0875
- eggNOG:   COG2827
- HOGENOM:   HBG678874
- OMA:   KCKDESL
- PhylomeDB:   Q03FT8
- BioCyc:   PPEN278197:PEPE_0875-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000305

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 11173; Mature: 11173

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIPLINGFYFYVLRCADNTLYGGYTINLINRVERHNKGQGAKYTKARRPVQLIYFESFD
CCCCEECCCEEEEEEECCCEEECCEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
NQHDAMSAEYQFKQRTRSSKIKFLKKNGISLTNLK
CCCCCCCHHHHHHHHHHHHHEEEEECCCCEEECCC
>Mature Secondary Structure
MEIPLINGFYFYVLRCADNTLYGGYTINLINRVERHNKGQGAKYTKARRPVQLIYFESFD
CCCCEECCCEEEEEEECCCEEECCEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
NQHDAMSAEYQFKQRTRSSKIKFLKKNGISLTNLK
CCCCCCCHHHHHHHHHHHHHEEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA