Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is dnaI [H]

Identifier: 116492461

GI number: 116492461

Start: 734227

End: 735156

Strand: Direct

Name: dnaI [H]

Synonym: PEPE_0693

Alternate gene names: 116492461

Gene position: 734227-735156 (Clockwise)

Preceding gene: 116492460

Following gene: 116492462

Centisome position: 40.07

GC content: 37.42

Gene sequence:

>930_bases
ATGGAAAATGTCCGAGAAATTTTGCAAGAATTAATGAGCAAAAGAAAGCTCGACCAGCGTTTTAATAACGTGATGAAATC
AGTGTATTCTGATCCAGAAGTGATTAGTTTTTGCGAGGAGCATCAAGACGAACTATCCAAGGAAGCTATCGAACGTGGAG
CGGCTAAGCTGTATGAATTTGTTTCAGAACGAAATAAGATTAAAAATAACCAAGCAACCTTTTTACCGGGATATCAGCCA
GAATTAGTCTTAAGCAATCATTTGATTGATATTGAGTATGTGCCCACGAAACAGACTCATTTATTAGAACAAGAACGTCA
TCGAAAAGCGTTAGTTAAATCGATTAGTATGCCTAAATTAATCCGTCATGCTTCATTGGAGGGATACTATCAGGAACCAG
AACGAACAGACGCTTTGGCTAAAACTTTAGCGTTTGTAAACGAATATTTAGAACGCCCTCAAGATTGGCATAAGGGTTTG
TATTTGACGGGAAGTTTTGGTGTGGGAAAAACGTATCTAATGGGCGCAATGGGGAACGCTTTGGCTGATGAAGGATATTC
GACAACTATTGTTCATTTTCCTAGTTTAGCTGTTGAATTAAAAAATGCGATTGGAAGTTCTAATACGATTCAAACTAAAA
TCGATGCGATTAAAAAAGCTCCGATTTTGGTAATTGACGATATTGGAGCGGATAGTATTTCTTCTTGGATTAGGGATGAC
GTATTGGGAGTAATTCTTGAATACCGAATGCAAGAAGAATTACCAACATTTTTTACATCTAATTTTTCAATGGACCAATT
AGAGCGAGAACATCTAACAGTCAATCAGAGAGGCGAAGCAGAACCTTTAAAAGCGAAAAGATTGATGGAACGAATTAAAT
TTTTGAGTGAGGAAGTCTCGATGACGGGAAAAAATCATCGACAGGATTGA

Upstream 100 bases:

>100_bases
CCGCTAAGACTAAAGAACCCAAGCAAGTTAATCCAGAAACAACTAAAAAAATTAATGAACAACTTAAAAAACTTCGTTCT
AGAGGCAAGGAGGGATAGTC

Downstream 100 bases:

>100_bases
CAAACAATCAAAAATAGGTAGAATAAATGTATAAATCACAGTCAAACATGTAGTTTTTAATTCAGGGAGCGGAGCCGCGA
CTGCAAGCGATGCACTTAAA

Product: primosomal protein DnaI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MENVREILQELMSKRKLDQRFNNVMKSVYSDPEVISFCEEHQDELSKEAIERGAAKLYEFVSERNKIKNNQATFLPGYQP
ELVLSNHLIDIEYVPTKQTHLLEQERHRKALVKSISMPKLIRHASLEGYYQEPERTDALAKTLAFVNEYLERPQDWHKGL
YLTGSFGVGKTYLMGAMGNALADEGYSTTIVHFPSLAVELKNAIGSSNTIQTKIDAIKKAPILVIDDIGADSISSWIRDD
VLGVILEYRMQEELPTFFTSNFSMDQLEREHLTVNQRGEAEPLKAKRLMERIKFLSEEVSMTGKNHRQD

Sequences:

>Translated_309_residues
MENVREILQELMSKRKLDQRFNNVMKSVYSDPEVISFCEEHQDELSKEAIERGAAKLYEFVSERNKIKNNQATFLPGYQP
ELVLSNHLIDIEYVPTKQTHLLEQERHRKALVKSISMPKLIRHASLEGYYQEPERTDALAKTLAFVNEYLERPQDWHKGL
YLTGSFGVGKTYLMGAMGNALADEGYSTTIVHFPSLAVELKNAIGSSNTIQTKIDAIKKAPILVIDDIGADSISSWIRDD
VLGVILEYRMQEELPTFFTSNFSMDQLEREHLTVNQRGEAEPLKAKRLMERIKFLSEEVSMTGKNHRQD
>Mature_309_residues
MENVREILQELMSKRKLDQRFNNVMKSVYSDPEVISFCEEHQDELSKEAIERGAAKLYEFVSERNKIKNNQATFLPGYQP
ELVLSNHLIDIEYVPTKQTHLLEQERHRKALVKSISMPKLIRHASLEGYYQEPERTDALAKTLAFVNEYLERPQDWHKGL
YLTGSFGVGKTYLMGAMGNALADEGYSTTIVHFPSLAVELKNAIGSSNTIQTKIDAIKKAPILVIDDIGADSISSWIRDD
VLGVILEYRMQEELPTFFTSNFSMDQLEREHLTVNQRGEAEPLKAKRLMERIKFLSEEVSMTGKNHRQD

Specific function: Probably involved in DNA replication [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR009928
- InterPro:   IPR002611 [H]

Pfam domain/function: PF07319 DnaI_N; PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 35455; Mature: 35455

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVREILQELMSKRKLDQRFNNVMKSVYSDPEVISFCEEHQDELSKEAIERGAAKLYEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSERNKIKNNQATFLPGYQPELVLSNHLIDIEYVPTKQTHLLEQERHRKALVKSISMPKL
HHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHH
IRHASLEGYYQEPERTDALAKTLAFVNEYLERPQDWHKGLYLTGSFGVGKTYLMGAMGNA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHHHH
LADEGYSTTIVHFPSLAVELKNAIGSSNTIQTKIDAIKKAPILVIDDIGADSISSWIRDD
HHCCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
VLGVILEYRMQEELPTFFTSNFSMDQLEREHLTVNQRGEAEPLKAKRLMERIKFLSEEVS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MTGKNHRQD
HCCCCCCCC
>Mature Secondary Structure
MENVREILQELMSKRKLDQRFNNVMKSVYSDPEVISFCEEHQDELSKEAIERGAAKLYEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSERNKIKNNQATFLPGYQPELVLSNHLIDIEYVPTKQTHLLEQERHRKALVKSISMPKL
HHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHH
IRHASLEGYYQEPERTDALAKTLAFVNEYLERPQDWHKGLYLTGSFGVGKTYLMGAMGNA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHHHH
LADEGYSTTIVHFPSLAVELKNAIGSSNTIQTKIDAIKKAPILVIDDIGADSISSWIRDD
HHCCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
VLGVILEYRMQEELPTFFTSNFSMDQLEREHLTVNQRGEAEPLKAKRLMERIKFLSEEVS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MTGKNHRQD
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027671; 8969504; 9387221; 9384377; 3027697; 1549481; 7773414 [H]