| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is yfmL [H]
Identifier: 116492385
GI number: 116492385
Start: 645769
End: 647085
Strand: Direct
Name: yfmL [H]
Synonym: PEPE_0590
Alternate gene names: 116492385
Gene position: 645769-647085 (Clockwise)
Preceding gene: 116492384
Following gene: 116492386
Centisome position: 35.24
GC content: 43.51
Gene sequence:
>1317_bases ATGAATGATTTATTTAAAAAGCATTTTAACGAAAAGGGTTTTGCAGAACCGACTTTGATTCAACAAAAAGTCGCTGAACC CCTTCGAAATGGGGAATCGGTGCTCGGGCTATCACCCACTGGTTCGGGAAAGACCCTCGCATTTGCCTTGCCGTTGATGG AAAAAATCACGCCTGGCGATGGAACTCAATTATTAGTACTATCTCCATCACAAGAACTTGCCATTCAGACGACGGATGTT TTCCGCGAATGGGCAGCTTTGATTGGACTTCGGGTCACTTCGATTACAGGGGGTGCCAACGTCCAACGTCAAATCGAACG CTTGAAGAAGAAACCGGAAATCGTGGTCGGTACTCCTGGTCGAGTTTTAACGTTAATTAACGAACGTCGCTTAAAAGTGA GTGAAATTCAAAGCTTGGTCATTGATGAAGCCGATGAACTCCTAACTGGTGAAAACCTTGAAGGGACTCGTCAAATTGAA GATCAACTCCTAGCCGATGTGCAATTAAGTTTCTTCTCCGCTACTAACGATTTAGCGCTAGATGATTTGGAAGCTTGGTT TGATGTGCATCCACAAGTGGTGGACGTCCGTGCTGAAGACAACACTCGCGGTCACGTTCAACATGGTTGGATTGAAGTGC CTGAAAAGATGAAAGCACGTATTTTAAAACAACTTAGTCGAGTTAAAAACTTCCAAGGTCTGGTCTTTTTTAACCACGTT TCGACGATGGAAAAGACAGCGGCTTTATTGAAGCATGAAGGCGTAGATGTCGGCAAAATTGCGGGACATCAAGTCCAAAT TGATCGTGCAGCAGCCATGCGACGTTTTAAGAAAAAAGAATTGTCTCTATTAATGGTAACTGATGTAGCGGCTCGAGGCT TAGACATCGATCGTTTACCAGCGGTGATTAATTACGATATTCCTCACAATGCCACTATCTATACACATCGTGTCGGACGG ACTGGTCGGATGGGCCAAGATGGGTATGTCATCAGTCTGGGAAATGATCATGACATTCGTGACTTACGAAAGATGATAAA GGAATTGGGGATTGAGGCTGAAAAATTAGCCATCCAAAACCGGAAAATCATTTTGGCTAGTGAATACGTTGAAGCACCTA AAGCACCATCGATCAAGGCTACTTTAACCAAAAAATCAGCTCCTGAACAAAAATCACAAGCTGGAGCTAAGGCTCCTAAA AACTCTAAAGCAAAGAGTCAAAAGCAATTTGATAACCCTCCCGCGACCCCCAAGAAGAAGGGTAAAAAGAAACATTCTAA GCGTAAAGGAATGCGACGCGTTAAGAAAGAGTTATAA
Upstream 100 bases:
>100_bases TTGGCTAGAAATAAGTCGAAATGTAAATAAACTACTATATAATCTCCGTCAAAATGGTAAGATATATTTTACCAATGAAA AAGAAGAGGACTAAACATTA
Downstream 100 bases:
>100_bases ATTTATTGAATTTTGGTTAATTATATTTTTTATAGTTAAAAAAAGGCCTAAATAGTGTAATATAGTCACTGTTGAAAGGT GGGTATATTTTTATGCGTAG
Product: superfamily II DNA/RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MNDLFKKHFNEKGFAEPTLIQQKVAEPLRNGESVLGLSPTGSGKTLAFALPLMEKITPGDGTQLLVLSPSQELAIQTTDV FREWAALIGLRVTSITGGANVQRQIERLKKKPEIVVGTPGRVLTLINERRLKVSEIQSLVIDEADELLTGENLEGTRQIE DQLLADVQLSFFSATNDLALDDLEAWFDVHPQVVDVRAEDNTRGHVQHGWIEVPEKMKARILKQLSRVKNFQGLVFFNHV STMEKTAALLKHEGVDVGKIAGHQVQIDRAAAMRRFKKKELSLLMVTDVAARGLDIDRLPAVINYDIPHNATIYTHRVGR TGRMGQDGYVISLGNDHDIRDLRKMIKELGIEAEKLAIQNRKIILASEYVEAPKAPSIKATLTKKSAPEQKSQAGAKAPK NSKAKSQKQFDNPPATPKKKGKKKHSKRKGMRRVKKEL
Sequences:
>Translated_438_residues MNDLFKKHFNEKGFAEPTLIQQKVAEPLRNGESVLGLSPTGSGKTLAFALPLMEKITPGDGTQLLVLSPSQELAIQTTDV FREWAALIGLRVTSITGGANVQRQIERLKKKPEIVVGTPGRVLTLINERRLKVSEIQSLVIDEADELLTGENLEGTRQIE DQLLADVQLSFFSATNDLALDDLEAWFDVHPQVVDVRAEDNTRGHVQHGWIEVPEKMKARILKQLSRVKNFQGLVFFNHV STMEKTAALLKHEGVDVGKIAGHQVQIDRAAAMRRFKKKELSLLMVTDVAARGLDIDRLPAVINYDIPHNATIYTHRVGR TGRMGQDGYVISLGNDHDIRDLRKMIKELGIEAEKLAIQNRKIILASEYVEAPKAPSIKATLTKKSAPEQKSQAGAKAPK NSKAKSQKQFDNPPATPKKKGKKKHSKRKGMRRVKKEL >Mature_438_residues MNDLFKKHFNEKGFAEPTLIQQKVAEPLRNGESVLGLSPTGSGKTLAFALPLMEKITPGDGTQLLVLSPSQELAIQTTDV FREWAALIGLRVTSITGGANVQRQIERLKKKPEIVVGTPGRVLTLINERRLKVSEIQSLVIDEADELLTGENLEGTRQIE DQLLADVQLSFFSATNDLALDDLEAWFDVHPQVVDVRAEDNTRGHVQHGWIEVPEKMKARILKQLSRVKNFQGLVFFNHV STMEKTAALLKHEGVDVGKIAGHQVQIDRAAAMRRFKKKELSLLMVTDVAARGLDIDRLPAVINYDIPHNATIYTHRVGR TGRMGQDGYVISLGNDHDIRDLRKMIKELGIEAEKLAIQNRKIILASEYVEAPKAPSIKATLTKKSAPEQKSQAGAKAPK NSKAKSQKQFDNPPATPKKKGKKKHSKRKGMRRVKKEL
Specific function: Has A Helix-Destabilizing Activity. Plays A Key Role In Optimal Cell Growth At Low Temperature And Is Required For Normal Cell Division. Suppressor Of A Mutant Defective In Rpsb Gene For Ribosomal Protein S2. [C]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=374, Percent_Identity=30.7486631016043, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI31542656, Length=367, Percent_Identity=33.5149863760218, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI224593278, Length=358, Percent_Identity=32.9608938547486, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI164664518, Length=366, Percent_Identity=30.0546448087432, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI7661920, Length=336, Percent_Identity=30.3571428571429, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI45446747, Length=377, Percent_Identity=30.2387267904509, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI45446743, Length=377, Percent_Identity=30.2387267904509, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI41327773, Length=366, Percent_Identity=31.6939890710383, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI38327634, Length=328, Percent_Identity=34.4512195121951, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI164419743, Length=335, Percent_Identity=32.2388059701493, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI51094101, Length=335, Percent_Identity=32.2388059701493, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI4758138, Length=351, Percent_Identity=31.3390313390313, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI148613856, Length=360, Percent_Identity=29.7222222222222, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI38201710, Length=360, Percent_Identity=29.7222222222222, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI41327776, Length=373, Percent_Identity=28.4182305630027, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI13514831, Length=323, Percent_Identity=32.1981424148607, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI4503529, Length=337, Percent_Identity=32.0474777448071, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=30.188679245283, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI21040371, Length=334, Percent_Identity=29.940119760479, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=30.188679245283, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=30.188679245283, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI83700235, Length=337, Percent_Identity=32.0474777448071, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI169881239, Length=371, Percent_Identity=29.9191374663073, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI13514809, Length=371, Percent_Identity=29.9191374663073, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI222352149, Length=354, Percent_Identity=30.7909604519774, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI8922886, Length=365, Percent_Identity=29.5890410958904, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI4758112, Length=334, Percent_Identity=29.3413173652695, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI18375623, Length=334, Percent_Identity=29.3413173652695, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI6005743, Length=365, Percent_Identity=29.3150684931507, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI62241022, Length=365, Percent_Identity=29.3150684931507, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI41327771, Length=363, Percent_Identity=28.3746556473829, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI21071032, Length=363, Percent_Identity=29.2011019283747, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI38569505, Length=363, Percent_Identity=29.4765840220386, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI55749865, Length=371, Percent_Identity=27.4932614555256, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI62241024, Length=354, Percent_Identity=29.0960451977401, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI38569503, Length=373, Percent_Identity=28.9544235924933, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI188035877, Length=361, Percent_Identity=27.9778393351801, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI256223453, Length=332, Percent_Identity=29.8192771084337, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=29.7805642633229, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=27.390180878553, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI50659095, Length=383, Percent_Identity=27.4151436031332, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI262118318, Length=338, Percent_Identity=28.4023668639053, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI216548263, Length=338, Percent_Identity=28.4023668639053, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI262231852, Length=338, Percent_Identity=28.4023668639053, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI13518015, Length=338, Percent_Identity=28.4023668639053, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI164419732, Length=338, Percent_Identity=26.3313609467456, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI256773275, Length=354, Percent_Identity=28.5310734463277, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI41327779, Length=348, Percent_Identity=28.448275862069, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI17505907, Length=376, Percent_Identity=26.8617021276596, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI154759257, Length=372, Percent_Identity=26.3440860215054, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI4826686, Length=330, Percent_Identity=28.4848484848485, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI9506931, Length=366, Percent_Identity=26.2295081967213, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI20336298, Length=140, Percent_Identity=34.2857142857143, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI87082221, Length=360, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1787016, Length=362, Percent_Identity=31.767955801105, Blast_Score=169, Evalue=3e-43, Organism=Escherichia coli, GI1788930, Length=436, Percent_Identity=30.2752293577982, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1787605, Length=332, Percent_Identity=30.421686746988, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1790214, Length=340, Percent_Identity=29.1176470588235, Blast_Score=127, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=32.378223495702, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=32.378223495702, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17555296, Length=377, Percent_Identity=32.0954907161804, Blast_Score=176, Evalue=1e-44, Organism=Caenorhabditis elegans, GI71987143, Length=336, Percent_Identity=30.6547619047619, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17510559, Length=393, Percent_Identity=29.7709923664122, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17552114, Length=376, Percent_Identity=30.5851063829787, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17507121, Length=355, Percent_Identity=30.1408450704225, Blast_Score=164, Evalue=9e-41, Organism=Caenorhabditis elegans, GI71995724, Length=355, Percent_Identity=30.1408450704225, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI115532548, Length=367, Percent_Identity=28.6103542234332, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI115532546, Length=356, Percent_Identity=28.9325842696629, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI115533224, Length=349, Percent_Identity=30.945558739255, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI86570094, Length=332, Percent_Identity=32.2289156626506, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI71997889, Length=449, Percent_Identity=28.0623608017817, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17505370, Length=327, Percent_Identity=35.1681957186544, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI193206561, Length=326, Percent_Identity=28.8343558282209, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=31.2154696132597, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71982858, Length=332, Percent_Identity=29.2168674698795, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17556951, Length=341, Percent_Identity=31.0850439882698, Blast_Score=137, Evalue=8e-33, Organism=Caenorhabditis elegans, GI32565321, Length=360, Percent_Identity=28.8888888888889, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17537549, Length=371, Percent_Identity=28.0323450134771, Blast_Score=134, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=29.4444444444444, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17509811, Length=329, Percent_Identity=31.306990881459, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17508543, Length=389, Percent_Identity=27.7634961439589, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71995718, Length=384, Percent_Identity=28.6458333333333, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17510307, Length=369, Percent_Identity=29.5392953929539, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17510309, Length=379, Percent_Identity=28.4960422163588, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17507877, Length=365, Percent_Identity=29.041095890411, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71995514, Length=369, Percent_Identity=29.5392953929539, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17507879, Length=362, Percent_Identity=27.0718232044199, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17507641, Length=371, Percent_Identity=28.5714285714286, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=27.7628032345013, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71990816, Length=362, Percent_Identity=27.3480662983425, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17507881, Length=385, Percent_Identity=27.7922077922078, Blast_Score=119, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17536099, Length=371, Percent_Identity=26.1455525606469, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17536101, Length=375, Percent_Identity=26.1333333333333, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17536103, Length=382, Percent_Identity=26.7015706806283, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17553716, Length=336, Percent_Identity=26.1904761904762, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI25148203, Length=379, Percent_Identity=22.9551451187335, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71982862, Length=167, Percent_Identity=29.3413173652695, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=38.2022471910112, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI193208216, Length=140, Percent_Identity=30, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320041, Length=368, Percent_Identity=31.25, Blast_Score=176, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6321856, Length=362, Percent_Identity=32.5966850828729, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6324217, Length=333, Percent_Identity=32.1321321321321, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6323947, Length=328, Percent_Identity=33.5365853658537, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323021, Length=333, Percent_Identity=31.2312312312312, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6321360, Length=337, Percent_Identity=33.8278931750742, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320119, Length=331, Percent_Identity=31.7220543806647, Blast_Score=149, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6321963, Length=352, Percent_Identity=30.3977272727273, Blast_Score=148, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6322912, Length=349, Percent_Identity=31.8051575931232, Blast_Score=146, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6322323, Length=349, Percent_Identity=31.8051575931232, Blast_Score=146, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6320224, Length=347, Percent_Identity=30.2593659942363, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6319618, Length=412, Percent_Identity=28.3980582524272, Blast_Score=142, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6322427, Length=341, Percent_Identity=31.6715542521994, Blast_Score=135, Evalue=9e-33, Organism=Saccharomyces cerevisiae, GI6324778, Length=372, Percent_Identity=27.9569892473118, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6324620, Length=344, Percent_Identity=30.2325581395349, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=27.3684210526316, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320449, Length=379, Percent_Identity=26.6490765171504, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6321267, Length=443, Percent_Identity=28.6681715575621, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6321111, Length=378, Percent_Identity=26.7195767195767, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6319714, Length=365, Percent_Identity=29.8630136986301, Blast_Score=117, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6320173, Length=195, Percent_Identity=36.4102564102564, Blast_Score=113, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6320400, Length=351, Percent_Identity=26.7806267806268, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6323306, Length=392, Percent_Identity=24.4897959183673, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI24583281, Length=344, Percent_Identity=32.2674418604651, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24583279, Length=344, Percent_Identity=32.2674418604651, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI24585582, Length=372, Percent_Identity=32.258064516129, Blast_Score=175, Evalue=7e-44, Organism=Drosophila melanogaster, GI18857967, Length=357, Percent_Identity=31.9327731092437, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24645031, Length=336, Percent_Identity=31.25, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI28571808, Length=347, Percent_Identity=33.4293948126801, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI28571809, Length=347, Percent_Identity=33.4293948126801, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=33.8983050847458, Blast_Score=161, Evalue=9e-40, Organism=Drosophila melanogaster, GI24644479, Length=380, Percent_Identity=30.7894736842105, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI24644483, Length=380, Percent_Identity=30.7894736842105, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI281361218, Length=380, Percent_Identity=30.7894736842105, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24644481, Length=380, Percent_Identity=30.7894736842105, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24644487, Length=380, Percent_Identity=30.7894736842105, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI45551833, Length=380, Percent_Identity=30.7894736842105, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24644485, Length=380, Percent_Identity=30.7894736842105, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI17136814, Length=339, Percent_Identity=32.1533923303835, Blast_Score=158, Evalue=8e-39, Organism=Drosophila melanogaster, GI28574962, Length=361, Percent_Identity=31.8559556786704, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI21356161, Length=394, Percent_Identity=30.9644670050761, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24642151, Length=343, Percent_Identity=31.1953352769679, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI28575014, Length=357, Percent_Identity=31.3725490196078, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI24662330, Length=339, Percent_Identity=30.3834808259587, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24584399, Length=341, Percent_Identity=29.3255131964809, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI17985987, Length=374, Percent_Identity=29.9465240641711, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24582080, Length=336, Percent_Identity=30.952380952381, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24582078, Length=336, Percent_Identity=30.952380952381, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI17136248, Length=336, Percent_Identity=30.952380952381, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24582075, Length=336, Percent_Identity=30.952380952381, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24666101, Length=454, Percent_Identity=29.0748898678414, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24581954, Length=337, Percent_Identity=29.673590504451, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24581952, Length=337, Percent_Identity=29.673590504451, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24581956, Length=337, Percent_Identity=29.673590504451, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24584994, Length=373, Percent_Identity=28.686327077748, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI17647335, Length=378, Percent_Identity=26.984126984127, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=27.8551532033426, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI21355559, Length=340, Percent_Identity=32.0588235294118, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI18859659, Length=406, Percent_Identity=28.0788177339901, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI28571338, Length=406, Percent_Identity=28.0788177339901, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI20130173, Length=321, Percent_Identity=27.7258566978193, Blast_Score=118, Evalue=9e-27, Organism=Drosophila melanogaster, GI281365720, Length=305, Percent_Identity=30.1639344262295, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24642822, Length=408, Percent_Identity=27.4509803921569, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI24643725, Length=366, Percent_Identity=25.6830601092896, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI19920478, Length=339, Percent_Identity=27.4336283185841, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI17136666, Length=424, Percent_Identity=25, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48760; Mature: 48760
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLFKKHFNEKGFAEPTLIQQKVAEPLRNGESVLGLSPTGSGKTLAFALPLMEKITPGD CCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEHHHHHCCCCC GTQLLVLSPSQELAIQTTDVFREWAALIGLRVTSITGGANVQRQIERLKKKPEIVVGTPG CCEEEEECCCCHHEEEHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCCEEEECCC RVLTLINERRLKVSEIQSLVIDEADELLTGENLEGTRQIEDQLLADVQLSFFSATNDLAL CEEEEHHHCCCCHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH DDLEAWFDVHPQVVDVRAEDNTRGHVQHGWIEVPEKMKARILKQLSRVKNFQGLVFFNHV HHHHHHHCCCCEEEEEEECCCCCCCEECCCEECCHHHHHHHHHHHHHHCCCCCEEEEHHH STMEKTAALLKHEGVDVGKIAGHQVQIDRAAAMRRFKKKELSLLMVTDVAARGLDIDRLP HHHHHHHHHHHHCCCCHHHCCCCEEEEHHHHHHHHHHHHHCCEEEEEHHHHCCCCHHHCC AVINYDIPHNATIYTHRVGRTGRMGQDGYVISLGNDHDIRDLRKMIKELGIEAEKLAIQN EEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHCC RKIILASEYVEAPKAPSIKATLTKKSAPEQKSQAGAKAPKNSKAKSQKQFDNPPATPKKK CEEEEEEHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHH GKKKHSKRKGMRRVKKEL HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNDLFKKHFNEKGFAEPTLIQQKVAEPLRNGESVLGLSPTGSGKTLAFALPLMEKITPGD CCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEHHHHHCCCCC GTQLLVLSPSQELAIQTTDVFREWAALIGLRVTSITGGANVQRQIERLKKKPEIVVGTPG CCEEEEECCCCHHEEEHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCCEEEECCC RVLTLINERRLKVSEIQSLVIDEADELLTGENLEGTRQIEDQLLADVQLSFFSATNDLAL CEEEEHHHCCCCHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH DDLEAWFDVHPQVVDVRAEDNTRGHVQHGWIEVPEKMKARILKQLSRVKNFQGLVFFNHV HHHHHHHCCCCEEEEEEECCCCCCCEECCCEECCHHHHHHHHHHHHHHCCCCCEEEEHHH STMEKTAALLKHEGVDVGKIAGHQVQIDRAAAMRRFKKKELSLLMVTDVAARGLDIDRLP HHHHHHHHHHHHCCCCHHHCCCCEEEEHHHHHHHHHHHHHCCEEEEEHHHHCCCCHHHCC AVINYDIPHNATIYTHRVGRTGRMGQDGYVISLGNDHDIRDLRKMIKELGIEAEKLAIQN EEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHCC RKIILASEYVEAPKAPSIKATLTKKSAPEQKSQAGAKAPKNSKAKSQKQFDNPPATPKKK CEEEEEEHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHH GKKKHSKRKGMRRVKKEL HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]