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The map label for this gene is lytR [H]

Identifier: 116492386

GI number: 116492386

Start: 647178

End: 648206

Strand: Direct

Name: lytR [H]

Synonym: PEPE_0591

Alternate gene names: 116492386

Gene position: 647178-648206 (Clockwise)

Preceding gene: 116492385

Following gene: 116492387

Centisome position: 35.32

GC content: 39.65

Gene sequence:

>1029_bases
ATGCGTAGAGAACATACAAAAAAATCGCATACTGTGCGAAACACGATTTTAATCGTTCTGGCAGTTATTTTACTTGGAGG
AGGGGTCTACGGTTTTCGGAAGTATCAAAATGTGAAAAATGCCGTGGATAATACCTATAGTAGTGCAGGAATTAAAAAAC
AACGTAATACAAATAGTTTGTTAAATGGTAAGAAGCCCATTTCGATTTTATTAATGGGAACTGACACGGGGGCTTTAGGT
CGTTCATATAAGGGACGGACGGATAGTATGATGGTGGTAACCATTAATCCGAAGACTAAAAAGACCACGATTACTAGTAT
TCCACGTGATTTAGGTGTTACTATTCCAGGTTATGAATCGAAGTCACCTTCTAAGATCAATGCTGCTTACGCCTTTGGTC
AAGCTGGAACGGCGATTAAAACTGTTCAACAAGTGTTCAACGTTCCGATTGATTTCTATGTTTTAGTTAACATGGGCGGT
ATGGAAAAAGTTGTTGACGAAGCTGGTGGAGTAGATATCACGCCAACTTTGAGCTTTACGTATGATGGATATACCTTTAC
TAAAGGGGTTAAAACCCATATGAACGGGAAGAAAGCCTTGGCTTATTCAAGAATGCGCTACGATGATCCTCAAAATGACT
ATGGACGTCAGACTAGACAACGAGCAGTGTTAACTGCTATCATCAGCAAGAGCAGTTCTGTATCAAGCTTATTAAACAAA
GATTTTATAGATTCAATTTCTAATGAAACTAAGACCGACTTTACCTTTAACGATCTAGTCGACTTGGCTAAAAACTATCG
TTCATCAACCGGTAGCATTGAAGAAACCCATGCTCAAGGGGATGGACAGATGGTTAATGGTCAATCCATGGAAATTGTTT
CAAACACTGAATTACAACGGGTAACCAACTTTATTCGCAATGGATTAAGCTTAGAACACGAAAAGACGGGCACCGCAGCC
CTGTCTGCAAGCAGTGCTAACACTAGTGATAGTAGTGTGGAAGCAGCTAATATCAATGCAGGAAATTAA

Upstream 100 bases:

>100_bases
AGTTATAAATTTATTGAATTTTGGTTAATTATATTTTTTATAGTTAAAAAAAGGCCTAAATAGTGTAATATAGTCACTGT
TGAAAGGTGGGTATATTTTT

Downstream 100 bases:

>100_bases
GGAAAACTAAGGAGATAGAATCATGGCAGCAGAGTCAGAAGCAGTAAAAGAAGAAAAAAAACCATTTGATGTTGGTGACG
AAGTTACCGTAGCAAAGACC

Product: transcriptional regulator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRREHTKKSHTVRNTILIVLAVILLGGGVYGFRKYQNVKNAVDNTYSSAGIKKQRNTNSLLNGKKPISILLMGTDTGALG
RSYKGRTDSMMVVTINPKTKKTTITSIPRDLGVTIPGYESKSPSKINAAYAFGQAGTAIKTVQQVFNVPIDFYVLVNMGG
MEKVVDEAGGVDITPTLSFTYDGYTFTKGVKTHMNGKKALAYSRMRYDDPQNDYGRQTRQRAVLTAIISKSSSVSSLLNK
DFIDSISNETKTDFTFNDLVDLAKNYRSSTGSIEETHAQGDGQMVNGQSMEIVSNTELQRVTNFIRNGLSLEHEKTGTAA
LSASSANTSDSSVEAANINAGN

Sequences:

>Translated_342_residues
MRREHTKKSHTVRNTILIVLAVILLGGGVYGFRKYQNVKNAVDNTYSSAGIKKQRNTNSLLNGKKPISILLMGTDTGALG
RSYKGRTDSMMVVTINPKTKKTTITSIPRDLGVTIPGYESKSPSKINAAYAFGQAGTAIKTVQQVFNVPIDFYVLVNMGG
MEKVVDEAGGVDITPTLSFTYDGYTFTKGVKTHMNGKKALAYSRMRYDDPQNDYGRQTRQRAVLTAIISKSSSVSSLLNK
DFIDSISNETKTDFTFNDLVDLAKNYRSSTGSIEETHAQGDGQMVNGQSMEIVSNTELQRVTNFIRNGLSLEHEKTGTAA
LSASSANTSDSSVEAANINAGN
>Mature_342_residues
MRREHTKKSHTVRNTILIVLAVILLGGGVYGFRKYQNVKNAVDNTYSSAGIKKQRNTNSLLNGKKPISILLMGTDTGALG
RSYKGRTDSMMVVTINPKTKKTTITSIPRDLGVTIPGYESKSPSKINAAYAFGQAGTAIKTVQQVFNVPIDFYVLVNMGG
MEKVVDEAGGVDITPTLSFTYDGYTFTKGVKTHMNGKKALAYSRMRYDDPQNDYGRQTRQRAVLTAIISKSSSVSSLLNK
DFIDSISNETKTDFTFNDLVDLAKNYRSSTGSIEETHAQGDGQMVNGQSMEIVSNTELQRVTNFIRNGLSLEHEKTGTAA
LSASSANTSDSSVEAANINAGN

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 37158; Mature: 37158

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRREHTKKSHTVRNTILIVLAVILLGGGVYGFRKYQNVKNAVDNTYSSAGIKKQRNTNSL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LNGKKPISILLMGTDTGALGRSYKGRTDSMMVVTINPKTKKTTITSIPRDLGVTIPGYES
HCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCHHHCCCCCCCCC
KSPSKINAAYAFGQAGTAIKTVQQVFNVPIDFYVLVNMGGMEKVVDEAGGVDITPTLSFT
CCCCCEEHEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHCCCCEECEEEEEE
YDGYTFTKGVKTHMNGKKALAYSRMRYDDPQNDYGRQTRQRAVLTAIISKSSSVSSLLNK
ECCEEEECCCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DFIDSISNETKTDFTFNDLVDLAKNYRSSTGSIEETHAQGDGQMVNGQSMEIVSNTELQR
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCEEECCCCEEEECCHHHHH
VTNFIRNGLSLEHEKTGTAALSASSANTSDSSVEAANINAGN
HHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MRREHTKKSHTVRNTILIVLAVILLGGGVYGFRKYQNVKNAVDNTYSSAGIKKQRNTNSL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LNGKKPISILLMGTDTGALGRSYKGRTDSMMVVTINPKTKKTTITSIPRDLGVTIPGYES
HCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCHHHCCCCCCCCC
KSPSKINAAYAFGQAGTAIKTVQQVFNVPIDFYVLVNMGGMEKVVDEAGGVDITPTLSFT
CCCCCEEHEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHCCCCEECEEEEEE
YDGYTFTKGVKTHMNGKKALAYSRMRYDDPQNDYGRQTRQRAVLTAIISKSSSVSSLLNK
ECCEEEECCCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DFIDSISNETKTDFTFNDLVDLAKNYRSSTGSIEETHAQGDGQMVNGQSMEIVSNTELQR
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCEEECCCCEEEECCHHHHH
VTNFIRNGLSLEHEKTGTAALSASSANTSDSSVEAANINAGN
HHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663927 [H]