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The map label for this gene is 116492331

Identifier: 116492331

GI number: 116492331

Start: 592347

End: 594929

Strand: Direct

Name: 116492331

Synonym: PEPE_0535

Alternate gene names: NA

Gene position: 592347-594929 (Clockwise)

Preceding gene: 116492330

Following gene: 116492332

Centisome position: 32.33

GC content: 28.69

Gene sequence:

>2583_bases
ATGCTTAGCGAACTTAATATTTATAGAAATTACTCTAGTGATAAGAATGACATCGGAGCAGAATTTTACACGCCATTGTT
GTCAGAAACAACTAGGTTTAATCGAATAAGTGGGTATTTTAGTTCGAGAGCTCTTATATATTATTCAAAAGGAATCGAGC
AGTTAATTAAAAATAATGGATATTATAGACTAATTATTTCTTCTGATATTTCAAAAGAGGATTATGACTTAATTAAAGCG
GGATATCAGTTAAAAAATAAACTTAGTTCTAAGATTAAATTAAATTATGAAGCACTTTTAACTTCTGAAAAAAAAGATAT
TTCAAATTTAGCGTATTTAATAGAACAGGGAGTTGTTGATATTAGGATTGGTTTTACACACACGGGAATATTTCATTCTA
AGTTTGGCATTTTTTCCGATTCTGCTGATAACCAGGTGTTTTTCTCCGGTTCTTTGAATGAAACAGAGGCAGCTTTTAAA
TATAATTTTGAGGATATCTTAGTAACTAGAAGCTGGGACGATTTAGAAGATAAAAAAATGATTAGAAAAAAAACGATTGA
ATTTGATAATTATTGGAATGGAACAAATACTGATGGAATGGTATTTGTAAAGGAAATAAATGAAATTCTGCGTTTGAATT
TAATTAAATATAGTAAAGGCAAAATAATTATGGACGATAAATTACTTAACGAAAATGCTTTGATACTGTATTACAAGGAT
GGTAGTCTTTACGTTCAAAATAATTATGGGCGTTTAAGTTATAATCAAGAAAATAATAGAAGCTTAAAAAAAATAAAAAA
TAAGTATCTAGTAAATAATACATTGTGGGAATTTAAGAAAAATCTTGATTATAAAGAAATTGAGGATGTAATTGAAAAAT
TCAAAAAATTTGGAAAACGTACAGAAATTGAAATTTTTATTGCAGATTCTGTAACGGATTCTATAAAAAATTCAAAGTTT
GAAATAGAAGAAATATATAAACGAGGAATGTTATTCAAAAATCATGACGCAAGCCTAAGAGACTTATATAAGGATTTTGA
TTTTATAACATCAAATGAAATATCTAGAAAACTTAGGGATACTCAGTCATGGGTAAGTTTTTATATGGCACAAATGAAAC
GTGTTGCTAATTTTTCAGTTCCAGGAGCGGGAAAAACAGCCATGGTTTACGGTACATTTGCGTATTTAAGTTCTTCTAAA
GTTAATAAAATAGATCAATTGTTAGTAATCGGTCCCAAAAATTCATTTTTATCTTGGAAAGATGAATTTAATGCTGTATT
CAGAGATAAAAGAAAAATGAAGGTGTTAGATGTACATTCAGATAATTTTGATGAAGCAGACTTTTATAAATTATCTTTTG
CTGCGTATAACTTAATTTTAATAAATTATGAATCATTGAGTAAATATGAAAAGGCCCTAAAAAAAATTATTACTTCTAGA
ACAATGGTTGTTTTTGATGAAGTTCATAAAGTCAAGGGTATAGATACTATGAGGGCTCCTATAGCTATTGAAATTGCACA
AGGTGCAATGTATAGATATGTCCTTACTGGGACACCAATTCCGAATTCTTATAAGGATATTTGGAATTTCTTACATATTC
TGTATAAGAGTGAATATAAATCATTCTTTGGTTTCTCAATAAATAATCTATCCAATCCGAATACACATGAAATTAAATTG
ATTAATAATAAATTAAATCCATTCTTTTGGAGAGTTACCAAATCTGATTTAGATATCCCTAAACCAAACGGAGATAACAA
TTTAACATATATAGCTAATTCTAAGGAACAAACAGTGATTGATTTATTATGGAGAAAGTATGGAAAGCAACCTTTTAAAC
TGTATATTCGTTTAATACAAGCTGCTTCAAATCCTGAATTATTAAAGAAAAATATCGATAAATCTTTATTTTATGGAAAT
GAAGTTCAACAAAGTGAAGATGAAGAATTAGATACTGATTATAATAGTGAAATGGAAGACATACCAACCTTTAATAGGCA
AGAACTTGATATTATAGCTTCTCTAAAAGATTCAACAAAGTTTAAGGCATGCATAGAAAAGGCGGATGAATTAATCCAAG
ATAATAAAACTATTATTATATGGTGTATATTTGTTGCAACTATTGAAAAATTAAAAAGTAGGCTAGAATCTCTCGGCCAT
AAGGTTGCTGTCATATATGGAGGGACACCAGTTGGTGAGAGAGAGAAGATAATAAAAGATTTCCAATGCGGTTTGTATGA
TGTGTTAGTAACTAACCCACATACTCTAGCGGAGTCCGTTTCGTTACATATGATAGCTCACGACGCATTATATCTTGAAT
ACTCATTTAATTTAACACACATGCTGCAATCTAGAAATCGAATTCATCGTTTAGGGCTTAAAAAAGGAGATTATACATCT
TATTACTATTTTATGCTTGAAGGACAACAGAATAGAAGAAATACGATAGATTGGAAGATATATAATAGACTCAATGAGAA
ACGCGATATAATGGTTGATACAATTGAGAATCATGAATTACATCCAGAATTTAGTGTAGATGAAAAAGATGAAATTATTG
ATTTTATGAAAGAAGAAGAGTAA

Upstream 100 bases:

>100_bases
GCAGAATCAGTAAATAGGCTTTCAATGGCACAAAAGGCAGAGTTTGGTGACTATTTAACTAAAATTGAGCAAAAGGATAA
AATTTTGAGGAGTATAATAA

Downstream 100 bases:

>100_bases
TTATTGTATGATGGATGTATATAGGTATATAGGTATATAGGTATATAGGTGTATGGTTGTATATAGGTGTATGTAGGTGC
GTCTTGTGTCACGTGCTTGT

Product: SNF2 family DNA/RNA helicase

Products: NA

Alternate protein names: Type III Restriction Res Subunit; Helicase Domain Protein; Helicase; DNA Repair Helicase; Helicase Domain-Containing Protein; SNF2-Related Protein; DEAD/H Helicase; SNF2 Family Helicase; SNF2 Family DNA/RNA Helicase; Helicase-Like; DNA/RNA Helicase; Helicase SNF2 Family; DNA-Repair Protein; Type III Restriction Res Subunit Family

Number of amino acids: Translated: 860; Mature: 860

Protein sequence:

>860_residues
MLSELNIYRNYSSDKNDIGAEFYTPLLSETTRFNRISGYFSSRALIYYSKGIEQLIKNNGYYRLIISSDISKEDYDLIKA
GYQLKNKLSSKIKLNYEALLTSEKKDISNLAYLIEQGVVDIRIGFTHTGIFHSKFGIFSDSADNQVFFSGSLNETEAAFK
YNFEDILVTRSWDDLEDKKMIRKKTIEFDNYWNGTNTDGMVFVKEINEILRLNLIKYSKGKIIMDDKLLNENALILYYKD
GSLYVQNNYGRLSYNQENNRSLKKIKNKYLVNNTLWEFKKNLDYKEIEDVIEKFKKFGKRTEIEIFIADSVTDSIKNSKF
EIEEIYKRGMLFKNHDASLRDLYKDFDFITSNEISRKLRDTQSWVSFYMAQMKRVANFSVPGAGKTAMVYGTFAYLSSSK
VNKIDQLLVIGPKNSFLSWKDEFNAVFRDKRKMKVLDVHSDNFDEADFYKLSFAAYNLILINYESLSKYEKALKKIITSR
TMVVFDEVHKVKGIDTMRAPIAIEIAQGAMYRYVLTGTPIPNSYKDIWNFLHILYKSEYKSFFGFSINNLSNPNTHEIKL
INNKLNPFFWRVTKSDLDIPKPNGDNNLTYIANSKEQTVIDLLWRKYGKQPFKLYIRLIQAASNPELLKKNIDKSLFYGN
EVQQSEDEELDTDYNSEMEDIPTFNRQELDIIASLKDSTKFKACIEKADELIQDNKTIIIWCIFVATIEKLKSRLESLGH
KVAVIYGGTPVGEREKIIKDFQCGLYDVLVTNPHTLAESVSLHMIAHDALYLEYSFNLTHMLQSRNRIHRLGLKKGDYTS
YYYFMLEGQQNRRNTIDWKIYNRLNEKRDIMVDTIENHELHPEFSVDEKDEIIDFMKEEE

Sequences:

>Translated_860_residues
MLSELNIYRNYSSDKNDIGAEFYTPLLSETTRFNRISGYFSSRALIYYSKGIEQLIKNNGYYRLIISSDISKEDYDLIKA
GYQLKNKLSSKIKLNYEALLTSEKKDISNLAYLIEQGVVDIRIGFTHTGIFHSKFGIFSDSADNQVFFSGSLNETEAAFK
YNFEDILVTRSWDDLEDKKMIRKKTIEFDNYWNGTNTDGMVFVKEINEILRLNLIKYSKGKIIMDDKLLNENALILYYKD
GSLYVQNNYGRLSYNQENNRSLKKIKNKYLVNNTLWEFKKNLDYKEIEDVIEKFKKFGKRTEIEIFIADSVTDSIKNSKF
EIEEIYKRGMLFKNHDASLRDLYKDFDFITSNEISRKLRDTQSWVSFYMAQMKRVANFSVPGAGKTAMVYGTFAYLSSSK
VNKIDQLLVIGPKNSFLSWKDEFNAVFRDKRKMKVLDVHSDNFDEADFYKLSFAAYNLILINYESLSKYEKALKKIITSR
TMVVFDEVHKVKGIDTMRAPIAIEIAQGAMYRYVLTGTPIPNSYKDIWNFLHILYKSEYKSFFGFSINNLSNPNTHEIKL
INNKLNPFFWRVTKSDLDIPKPNGDNNLTYIANSKEQTVIDLLWRKYGKQPFKLYIRLIQAASNPELLKKNIDKSLFYGN
EVQQSEDEELDTDYNSEMEDIPTFNRQELDIIASLKDSTKFKACIEKADELIQDNKTIIIWCIFVATIEKLKSRLESLGH
KVAVIYGGTPVGEREKIIKDFQCGLYDVLVTNPHTLAESVSLHMIAHDALYLEYSFNLTHMLQSRNRIHRLGLKKGDYTS
YYYFMLEGQQNRRNTIDWKIYNRLNEKRDIMVDTIENHELHPEFSVDEKDEIIDFMKEEE
>Mature_860_residues
MLSELNIYRNYSSDKNDIGAEFYTPLLSETTRFNRISGYFSSRALIYYSKGIEQLIKNNGYYRLIISSDISKEDYDLIKA
GYQLKNKLSSKIKLNYEALLTSEKKDISNLAYLIEQGVVDIRIGFTHTGIFHSKFGIFSDSADNQVFFSGSLNETEAAFK
YNFEDILVTRSWDDLEDKKMIRKKTIEFDNYWNGTNTDGMVFVKEINEILRLNLIKYSKGKIIMDDKLLNENALILYYKD
GSLYVQNNYGRLSYNQENNRSLKKIKNKYLVNNTLWEFKKNLDYKEIEDVIEKFKKFGKRTEIEIFIADSVTDSIKNSKF
EIEEIYKRGMLFKNHDASLRDLYKDFDFITSNEISRKLRDTQSWVSFYMAQMKRVANFSVPGAGKTAMVYGTFAYLSSSK
VNKIDQLLVIGPKNSFLSWKDEFNAVFRDKRKMKVLDVHSDNFDEADFYKLSFAAYNLILINYESLSKYEKALKKIITSR
TMVVFDEVHKVKGIDTMRAPIAIEIAQGAMYRYVLTGTPIPNSYKDIWNFLHILYKSEYKSFFGFSINNLSNPNTHEIKL
INNKLNPFFWRVTKSDLDIPKPNGDNNLTYIANSKEQTVIDLLWRKYGKQPFKLYIRLIQAASNPELLKKNIDKSLFYGN
EVQQSEDEELDTDYNSEMEDIPTFNRQELDIIASLKDSTKFKACIEKADELIQDNKTIIIWCIFVATIEKLKSRLESLGH
KVAVIYGGTPVGEREKIIKDFQCGLYDVLVTNPHTLAESVSLHMIAHDALYLEYSFNLTHMLQSRNRIHRLGLKKGDYTS
YYYFMLEGQQNRRNTIDWKIYNRLNEKRDIMVDTIENHELHPEFSVDEKDEIIDFMKEEE

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324879, Length=273, Percent_Identity=25.2747252747253, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100637; Mature: 100637

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSELNIYRNYSSDKNDIGAEFYTPLLSETTRFNRISGYFSSRALIYYSKGIEQLIKNNG
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCC
YYRLIISSDISKEDYDLIKAGYQLKNKLSSKIKLNYEALLTSEKKDISNLAYLIEQGVVD
EEEEEEECCCCCCHHHHHHHHHHHHHHHCHHEEEEHHHEECCCHHHHHHHHHHHHCCCEE
IRIGFTHTGIFHSKFGIFSDSADNQVFFSGSLNETEAAFKYNFEDILVTRSWDDLEDKKM
EEEEEEECCEEHHCCCCCCCCCCCEEEEECCCCCCCHHEEECCEEEEEECCCCCHHHHHH
IRKKTIEFDNYWNGTNTDGMVFVKEINEILRLNLIKYSKGKIIMDDKLLNENALILYYKD
HHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHEEEEECCCCEEEECEECCCCEEEEEEEC
GSLYVQNNYGRLSYNQENNRSLKKIKNKYLVNNTLWEFKKNLDYKEIEDVIEKFKKFGKR
CEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
TEIEIFIADSVTDSIKNSKFEIEEIYKRGMLFKNHDASLRDLYKDFDFITSNEISRKLRD
CEEEEEEECCHHHHHCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHH
TQSWVSFYMAQMKRVANFSVPGAGKTAMVYGTFAYLSSSKVNKIDQLLVIGPKNSFLSWK
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCCH
DEFNAVFRDKRKMKVLDVHSDNFDEADFYKLSFAAYNLILINYESLSKYEKALKKIITSR
HHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHCC
TMVVFDEVHKVKGIDTMRAPIAIEIAQGAMYRYVLTGTPIPNSYKDIWNFLHILYKSEYK
HHEEHHHHHHHCCCCHHCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SFFGFSINNLSNPNTHEIKLINNKLNPFFWRVTKSDLDIPKPNGDNNLTYIANSKEQTVI
HHCCEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHH
DLLWRKYGKQPFKLYIRLIQAASNPELLKKNIDKSLFYGNEVQQSEDEELDTDYNSEMED
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHH
IPTFNRQELDIIASLKDSTKFKACIEKADELIQDNKTIIIWCIFVATIEKLKSRLESLGH
CCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCC
KVAVIYGGTPVGEREKIIKDFQCGLYDVLVTNPHTLAESVSLHMIAHDALYLEYSFNLTH
EEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHEEEEEEEEEEEEEEECCHHH
MLQSRNRIHRLGLKKGDYTSYYYFMLEGQQNRRNTIDWKIYNRLNEKRDIMVDTIENHEL
HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCC
HPEFSVDEKDEIIDFMKEEE
CCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLSELNIYRNYSSDKNDIGAEFYTPLLSETTRFNRISGYFSSRALIYYSKGIEQLIKNNG
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCC
YYRLIISSDISKEDYDLIKAGYQLKNKLSSKIKLNYEALLTSEKKDISNLAYLIEQGVVD
EEEEEEECCCCCCHHHHHHHHHHHHHHHCHHEEEEHHHEECCCHHHHHHHHHHHHCCCEE
IRIGFTHTGIFHSKFGIFSDSADNQVFFSGSLNETEAAFKYNFEDILVTRSWDDLEDKKM
EEEEEEECCEEHHCCCCCCCCCCCEEEEECCCCCCCHHEEECCEEEEEECCCCCHHHHHH
IRKKTIEFDNYWNGTNTDGMVFVKEINEILRLNLIKYSKGKIIMDDKLLNENALILYYKD
HHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHEEEEECCCCEEEECEECCCCEEEEEEEC
GSLYVQNNYGRLSYNQENNRSLKKIKNKYLVNNTLWEFKKNLDYKEIEDVIEKFKKFGKR
CEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
TEIEIFIADSVTDSIKNSKFEIEEIYKRGMLFKNHDASLRDLYKDFDFITSNEISRKLRD
CEEEEEEECCHHHHHCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHH
TQSWVSFYMAQMKRVANFSVPGAGKTAMVYGTFAYLSSSKVNKIDQLLVIGPKNSFLSWK
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCCH
DEFNAVFRDKRKMKVLDVHSDNFDEADFYKLSFAAYNLILINYESLSKYEKALKKIITSR
HHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHCC
TMVVFDEVHKVKGIDTMRAPIAIEIAQGAMYRYVLTGTPIPNSYKDIWNFLHILYKSEYK
HHEEHHHHHHHCCCCHHCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SFFGFSINNLSNPNTHEIKLINNKLNPFFWRVTKSDLDIPKPNGDNNLTYIANSKEQTVI
HHCCEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHH
DLLWRKYGKQPFKLYIRLIQAASNPELLKKNIDKSLFYGNEVQQSEDEELDTDYNSEMED
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHH
IPTFNRQELDIIASLKDSTKFKACIEKADELIQDNKTIIIWCIFVATIEKLKSRLESLGH
CCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCC
KVAVIYGGTPVGEREKIIKDFQCGLYDVLVTNPHTLAESVSLHMIAHDALYLEYSFNLTH
EEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHEEEEEEEEEEEEEEECCHHH
MLQSRNRIHRLGLKKGDYTSYYYFMLEGQQNRRNTIDWKIYNRLNEKRDIMVDTIENHEL
HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCC
HPEFSVDEKDEIIDFMKEEE
CCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA