Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492330

Identifier: 116492330

GI number: 116492330

Start: 591152

End: 592354

Strand: Direct

Name: 116492330

Synonym: PEPE_0534

Alternate gene names: NA

Gene position: 591152-592354 (Clockwise)

Preceding gene: 116492329

Following gene: 116492331

Centisome position: 32.26

GC content: 30.09

Gene sequence:

>1203_bases
ATGAATTTAACGGAACAAGCGTTTGAAAAAGTAACAGAAAAAATATTAAGTTTGGCAGGAAAAAGTGAGAATTTCCCCGT
TTATCGTATCCCAATAGATTTATTAAAATACAACATAAAAAATGGGCGAATTGCAACATATGTTTCTGAATATCAAGCAG
AAGGAAAAAGATTTCCTGATAGTAATGACGAACTTAATTTTGTAATTGAACAGTACATTGAGCAAAGTAACCCTAATGAA
TTAGCTAAAACCAAAAGGAACATTAAATTACTAGGGCAAATAGAACCTGCTGTAGTTTTATCAAATGGTGTTGTTATAGA
TGGAAATAGAAGGTTTACCTCACTTCGTCAATTAGTTCGTGAAGGTCAAGGTGCTCGTTTTGAATACTTAAACGCGGTTA
TACTGAAATCAGGTTCTTACAATGAAAAGGATATAAAGAGGTTAGAGTTGAATCTCCAGCATGGAGTTGCAGCAAAAATT
GATTATAATCCTATCGATCGATTAGTAGATATTTATTGGGATTTAATTAGTGAGAAAAGAATTTTTACACCTGAAGAATA
TGCTAGGGAAACAGATATGAAATTAGCAGAGCTAAAAAAAGAAATTGCAATAGCAAATCTTATGTTAGATTACTTAAAGT
TTATTAATCAGGAAAAGAAATTTTACATTGCTCGACAACAAAAAATTGATGGACCGTTGAGAGAAATTTTTAATATTTTA
AATAGTCCTAAGCTGGATAAGGATAATGAAGAAGATATAAAAGAAATATTATTTACTAGTATTTTTACGCTAAGCGGTGA
TATTACTCGTGAAATTCGAGATTTAAAAAAAGTATTGCTAGATAAAGAAGCTTCACAAGAATTAATTGAAAATCTTGATA
ATTCTGAGATTTTAGATGATATTAATGATGAATTGAATCAGGAGGAAAATATTAAAAAAGTTGAAAAAGAAAAAAGAGTA
GAGATGGAGCCAGAGTTAACAACTGTTTTTCGTAAAATGGTAGATGAGTCGGTTGATAATAAGAAAATTTCAATGGCCCA
GAATGAGCCAATTGAAATTTTAGCTAAAGCAGTTAATTACTTGAATAAAATTGATGCAGAATCAGTAAATAGGCTTTCAA
TGGCACAAAAGGCAGAGTTTGGTGACTATTTAACTAAAATTGAGCAAAAGGATAAAATTTTGAGGAGTATAATAAATGCT
TAG

Upstream 100 bases:

>100_bases
AGATTAGAAACAGACTTACTAGTTACGGTGCATATTATTCCCGACCATTAAACAAGTTTTATTTTGACAAAGAAGATTAT
TTAAATGAGGTGTATGGAAG

Downstream 100 bases:

>100_bases
CGAACTTAATATTTATAGAAATTACTCTAGTGATAAGAATGACATCGGAGCAGAATTTTACACGCCATTGTTGTCAGAAA
CAACTAGGTTTAATCGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNLTEQAFEKVTEKILSLAGKSENFPVYRIPIDLLKYNIKNGRIATYVSEYQAEGKRFPDSNDELNFVIEQYIEQSNPNE
LAKTKRNIKLLGQIEPAVVLSNGVVIDGNRRFTSLRQLVREGQGARFEYLNAVILKSGSYNEKDIKRLELNLQHGVAAKI
DYNPIDRLVDIYWDLISEKRIFTPEEYARETDMKLAELKKEIAIANLMLDYLKFINQEKKFYIARQQKIDGPLREIFNIL
NSPKLDKDNEEDIKEILFTSIFTLSGDITREIRDLKKVLLDKEASQELIENLDNSEILDDINDELNQEENIKKVEKEKRV
EMEPELTTVFRKMVDESVDNKKISMAQNEPIEILAKAVNYLNKIDAESVNRLSMAQKAEFGDYLTKIEQKDKILRSIINA

Sequences:

>Translated_400_residues
MNLTEQAFEKVTEKILSLAGKSENFPVYRIPIDLLKYNIKNGRIATYVSEYQAEGKRFPDSNDELNFVIEQYIEQSNPNE
LAKTKRNIKLLGQIEPAVVLSNGVVIDGNRRFTSLRQLVREGQGARFEYLNAVILKSGSYNEKDIKRLELNLQHGVAAKI
DYNPIDRLVDIYWDLISEKRIFTPEEYARETDMKLAELKKEIAIANLMLDYLKFINQEKKFYIARQQKIDGPLREIFNIL
NSPKLDKDNEEDIKEILFTSIFTLSGDITREIRDLKKVLLDKEASQELIENLDNSEILDDINDELNQEENIKKVEKEKRV
EMEPELTTVFRKMVDESVDNKKISMAQNEPIEILAKAVNYLNKIDAESVNRLSMAQKAEFGDYLTKIEQKDKILRSIINA
>Mature_400_residues
MNLTEQAFEKVTEKILSLAGKSENFPVYRIPIDLLKYNIKNGRIATYVSEYQAEGKRFPDSNDELNFVIEQYIEQSNPNE
LAKTKRNIKLLGQIEPAVVLSNGVVIDGNRRFTSLRQLVREGQGARFEYLNAVILKSGSYNEKDIKRLELNLQHGVAAKI
DYNPIDRLVDIYWDLISEKRIFTPEEYARETDMKLAELKKEIAIANLMLDYLKFINQEKKFYIARQQKIDGPLREIFNIL
NSPKLDKDNEEDIKEILFTSIFTLSGDITREIRDLKKVLLDKEASQELIENLDNSEILDDINDELNQEENIKKVEKEKRV
EMEPELTTVFRKMVDESVDNKKISMAQNEPIEILAKAVNYLNKIDAESVNRLSMAQKAEFGDYLTKIEQKDKILRSIINA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46393; Mature: 46393

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTEQAFEKVTEKILSLAGKSENFPVYRIPIDLLKYNIKNGRIATYVSEYQAEGKRFPD
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
SNDELNFVIEQYIEQSNPNELAKTKRNIKLLGQIEPAVVLSNGVVIDGNRRFTSLRQLVR
CCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHCCCCCEEEEECCEEEECCCHHHHHHHHHH
EGQGARFEYLNAVILKSGSYNEKDIKRLELNLQHGVAAKIDYNPIDRLVDIYWDLISEKR
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCC
IFTPEEYARETDMKLAELKKEIAIANLMLDYLKFINQEKKFYIARQQKIDGPLREIFNIL
CCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH
NSPKLDKDNEEDIKEILFTSIFTLSGDITREIRDLKKVLLDKEASQELIENLDNSEILDD
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHH
INDELNQEENIKKVEKEKRVEMEPELTTVFRKMVDESVDNKKISMAQNEPIEILAKAVNY
HHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHH
LNKIDAESVNRLSMAQKAEFGDYLTKIEQKDKILRSIINA
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLTEQAFEKVTEKILSLAGKSENFPVYRIPIDLLKYNIKNGRIATYVSEYQAEGKRFPD
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
SNDELNFVIEQYIEQSNPNELAKTKRNIKLLGQIEPAVVLSNGVVIDGNRRFTSLRQLVR
CCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHCCCCCEEEEECCEEEECCCHHHHHHHHHH
EGQGARFEYLNAVILKSGSYNEKDIKRLELNLQHGVAAKIDYNPIDRLVDIYWDLISEKR
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCC
IFTPEEYARETDMKLAELKKEIAIANLMLDYLKFINQEKKFYIARQQKIDGPLREIFNIL
CCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH
NSPKLDKDNEEDIKEILFTSIFTLSGDITREIRDLKKVLLDKEASQELIENLDNSEILDD
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHH
INDELNQEENIKKVEKEKRVEMEPELTTVFRKMVDESVDNKKISMAQNEPIEILAKAVNY
HHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHH
LNKIDAESVNRLSMAQKAEFGDYLTKIEQKDKILRSIINA
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA