| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492304
Identifier: 116492304
GI number: 116492304
Start: 558257
End: 558595
Strand: Direct
Name: 116492304
Synonym: PEPE_0504
Alternate gene names: NA
Gene position: 558257-558595 (Clockwise)
Preceding gene: 116492303
Following gene: 116492305
Centisome position: 30.47
GC content: 46.61
Gene sequence:
>339_bases ATGACGATTAAGGTCGGCCACCAGTTTGCGTGCGAAGGCCATCTTCTCGTCGAATTCGGTCATGTGCAAAGTAAACGGGA CGCTTTGGTAATTAAAGTTTTCGCCGATATAGCCCGGATCAGTCACGTAGCGCAAGTTGTTTTCGTCGTGGCGACTGCCC GGTTTCAGGACGGTATCCAAATACTGATAGAGAATCGTTGGATCGTAGTTCAGCGGCTTATCAAGGGTCGTGGAAAGCTT GTAGCCGGTTGCTTGACCAGCAAATTGTTCGTTGATTTAGACTTGGGTAAGGCTTTGATACAATTTCAAAACGATCACTC CTCTTCTTTTCACTTTTAG
Upstream 100 bases:
>100_bases GAGAGAAGCATCGCGACTAGGAAAGGAGGGCAACAGGATTGCTTTAATCAACAAAGACCAGTTCGATAGTTTCATCTTCC GGTTTGATGTTGACAGATAA
Downstream 100 bases:
>100_bases TATAGCAGTTATGGTAGATTGTAAAATTAATCCGAACGCTGATCTTTTTTGTCCGAACAGCGTTCGGATTAATTTTACAA TCTACCTTTTACCAAGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQILIENRWIVVQRLIKGRGKL VAGCLTSKLFVDLDLGKALIQFQNDHSSSFHF
Sequences:
>Translated_112_residues MTIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQILIENRWIVVQRLIKGRGKL VAGCLTSKLFVDLDLGKALIQFQNDHSSSFHF >Mature_111_residues TIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQILIENRWIVVQRLIKGRGKLV AGCLTSKLFVDLDLGKALIQFQNDHSSSFHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12541; Mature: 12410
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQ CEEECCCEEECCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE ILIENRWIVVQRLIKGRGKLVAGCLTSKLFVDLDLGKALIQFQNDHSSSFHF EEEECCHHHHHHHHCCCCCEEEHHHHHHHEEEECCCHHEEEECCCCCCCCCC >Mature Secondary Structure TIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQ EEECCCEEECCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE ILIENRWIVVQRLIKGRGKLVAGCLTSKLFVDLDLGKALIQFQNDHSSSFHF EEEECCHHHHHHHHCCCCCEEEHHHHHHHEEEECCCHHEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA