Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492128

Identifier: 116492128

GI number: 116492128

Start: 374427

End: 374834

Strand: Reverse

Name: 116492128

Synonym: PEPE_0325

Alternate gene names: NA

Gene position: 374834-374427 (Counterclockwise)

Preceding gene: 116492133

Following gene: 116492113

Centisome position: 20.46

GC content: 32.35

Gene sequence:

>408_bases
ATGAAAATTAATATTACAGAGAATGCAAAAGATTATTTATTAAAGAAAGATATCGACGGTAAGCATATCTTCTTAGCACT
TGATGATGGTTCTAGTAAATTTTCAAAATTAGGTGGATCATGTGCTATTGGTAATAAATTCCAACTAGTTATCTCATCTG
TTCCTGATCAAGCTTACACGGATACAATTGAAAACGATGCGGATCTTAATCTTACTACTGGTAAAGAAGAGGCTAATTAT
TTAGGTAATGGGCTAAAATTAGATTATAAAATGGGACTGCTTAAACTCAGTGATGATAGTAGCATCTTAGATGGTGCCGT
TACTGTTCAAAATTACGAACCAACAGATGCCCAAACTAAAGACGAACTCGCTAAAGATATGAAAGATATTGGTAATAAAA
TTTGCTAA

Upstream 100 bases:

>100_bases
AACCAAATCCTGAGCACAATATTTAACTTCTGTTTTAAATTAAGGTAATATCAAGTCGTAGGAGCTCAGTGTTTGTTTTA
CGCATAGGAGGAATTTTATT

Downstream 100 bases:

>100_bases
TAAAAATAAAGAGCCTTAACTTCTTTTTCTGAAGTTAAGGTTCTTTTTTATGCTGCTCTAAACATCATATTGAGTTTCTT
TAATTCCATCATTCATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKINITENAKDYLLKKDIDGKHIFLALDDGSSKFSKLGGSCAIGNKFQLVISSVPDQAYTDTIENDADLNLTTGKEEANY
LGNGLKLDYKMGLLKLSDDSSILDGAVTVQNYEPTDAQTKDELAKDMKDIGNKIC

Sequences:

>Translated_135_residues
MKINITENAKDYLLKKDIDGKHIFLALDDGSSKFSKLGGSCAIGNKFQLVISSVPDQAYTDTIENDADLNLTTGKEEANY
LGNGLKLDYKMGLLKLSDDSSILDGAVTVQNYEPTDAQTKDELAKDMKDIGNKIC
>Mature_135_residues
MKINITENAKDYLLKKDIDGKHIFLALDDGSSKFSKLGGSCAIGNKFQLVISSVPDQAYTDTIENDADLNLTTGKEEANY
LGNGLKLDYKMGLLKLSDDSSILDGAVTVQNYEPTDAQTKDELAKDMKDIGNKIC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14727; Mature: 14727

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINITENAKDYLLKKDIDGKHIFLALDDGSSKFSKLGGSCAIGNKFQLVISSVPDQAYT
CEEECCCCHHHHHEECCCCCCEEEEEEECCCHHHHHCCCCEEECCEEEEEEECCCCCHHH
DTIENDADLNLTTGKEEANYLGNGLKLDYKMGLLKLSDDSSILDGAVTVQNYEPTDAQTK
CCCCCCCCEEEECCCCHHHHCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCH
DELAKDMKDIGNKIC
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKINITENAKDYLLKKDIDGKHIFLALDDGSSKFSKLGGSCAIGNKFQLVISSVPDQAYT
CEEECCCCHHHHHEECCCCCCEEEEEEECCCHHHHHCCCCEEECCEEEEEEECCCCCHHH
DTIENDADLNLTTGKEEANYLGNGLKLDYKMGLLKLSDDSSILDGAVTVQNYEPTDAQTK
CCCCCCCCEEEECCCCHHHHCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCH
DELAKDMKDIGNKIC
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA