| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492133
Identifier: 116492133
GI number: 116492133
Start: 379605
End: 379835
Strand: Reverse
Name: 116492133
Synonym: PEPE_0330
Alternate gene names: NA
Gene position: 379835-379605 (Counterclockwise)
Preceding gene: 116492134
Following gene: 116492128
Centisome position: 20.73
GC content: 33.77
Gene sequence:
>231_bases ATGAGTGAAACCATTTTATTTAATCCCGGAGATTCAATTGGTAACTTCCATGATTATAATGAAGCTGTTCGTAAGGGACA TCTATACAAACAAAAGCAACGTCAAGACGATGATCTAGTAATTGTTAATAATCCTAGTAAAAATGAGGAGTACGCTATTT TCTACGTTAAGGATCGTCATCCCGAAAAAACTGAAAACAGCATCGAATACGATGTTAGCAAAAAGATTTAA
Upstream 100 bases:
>100_bases AATTTTGGATATATTAAATCCTTAAATTAGAGTCCATTTCGGTTGTTGATAGCGTTAACATCCGCTATAGTTAAGGTAGC ACAACAAGGAGGTGGACTTA
Downstream 100 bases:
>100_bases AATTTCAGAAAACAATTAAAAAGATGGAATCATACCTCGTTTAAAATCGGGCATGATTCCATCTTTTTTTACCAAACTAT ACTTAAATGTTCACAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSETILFNPGDSIGNFHDYNEAVRKGHLYKQKQRQDDDLVIVNNPSKNEEYAIFYVKDRHPEKTENSIEYDVSKKI
Sequences:
>Translated_76_residues MSETILFNPGDSIGNFHDYNEAVRKGHLYKQKQRQDDDLVIVNNPSKNEEYAIFYVKDRHPEKTENSIEYDVSKKI >Mature_75_residues SETILFNPGDSIGNFHDYNEAVRKGHLYKQKQRQDDDLVIVNNPSKNEEYAIFYVKDRHPEKTENSIEYDVSKKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8961; Mature: 8830
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETILFNPGDSIGNFHDYNEAVRKGHLYKQKQRQDDDLVIVNNPSKNEEYAIFYVKDRH CCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCC PEKTENSIEYDVSKKI CCCCCCCEEEEEECCC >Mature Secondary Structure SETILFNPGDSIGNFHDYNEAVRKGHLYKQKQRQDDDLVIVNNPSKNEEYAIFYVKDRH CCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCC PEKTENSIEYDVSKKI CCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA