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The map label for this gene is xylP [H]

Identifier: 116491970

GI number: 116491970

Start: 184771

End: 186117

Strand: Direct

Name: xylP [H]

Synonym: PEPE_0156

Alternate gene names: 116491970

Gene position: 184771-186117 (Clockwise)

Preceding gene: 116491969

Following gene: 116491971

Centisome position: 10.08

GC content: 35.26

Gene sequence:

>1347_bases
ATGAAAAATAAAAGTGATAAATTACCATTTTTGGAAAAGGTCAGCTATTCATTTACGGATATGGCAGGAAATTTATTGTA
CGTAACGATTTCCAGCTATATACTTTACTTTTATACGGACGTTTTCAAAATATCAGTAGCTGGTGCGGGTTTAATTTTAC
TGATTGCTAGAGTTGTAGATGCAATTAGTGCTCCCGTATGGGGCTCTATAGTAGATCATACGCACACACGGTGGGGACAG
AGTAGACCATATTTTCTTTGGTTGGCAATACCATTTGCAATTGCCACATTTTTAGCTTTTACGGCACCTAACCTTTCGGG
AGATGCAAAATTATGGTATGCAGGTATTACTTATATTTTGGCTGCTGGTGTTATCTATACAGGAATTCAAACACCAATTA
CATCTATTTTACCTAGTTTGACTGCGGATACCGATGAACGAATAAGTGCTAATACTTTTCGAATGGCAGGAGGAAATATT
GGAGCATTTATCACCTCAACATTTTGCTTACCACTAGTTGCTTTTTTAGGGCAAGGAAATGACAAACATGGTTTCATGTT
GACACTTGGCATTTTTGGTACGTTAGCGGTAATATTGTTATTTTTAGCATTTAGAAATTTGAGAGAAAGAAAAGATGTCG
AAGTAAAATCAATTCCATTTAAAGATAGTTTGAAAGCTACCGTTGGTAATAAACCTTGGTTTATTTTGGTTATTTCTTTT
GTTATCTATTGGATAGCTCAAGCTGATCGTAATGGTATTTCAGTTTATTACGCTAAATACAATCTTGGAAATGAGCAGTT
AACATCAGTTTTTAACGGGTTACAAGTATTGGGAATAATAGCAACCATTTCAATTCCATTCGTTGTAAAAGTAACAAACA
AAACAATGACGATGTTAATTGGATTAGCAATTGGAGCCTTTGGACAAGCTATGATGGCTTTTGCTGGTAGTAATTTTGCT
TTAGTAATTGTGGCTTGGGTAATAGGAATTTTTGGGGCAGCGCTTGCATGTGCAATGCCGTTTGCAATGCTAGCAGATAC
GGTGGATTTTGGAGAATGGAAAACAGGCATAAGAGCATCTGGATTTTTGACCGCTGTTGGTAGTGCTTTTTGTATTCAAC
TAGGTTCTGGATTTGGAAGTTTTATTCCTTCTAAAATCATGGCCGCTGCAGGTTTTGTAGCAAACCAAAAACAAACTGCT
GAATCATTGGCTTCTATAAAATTCTGTTTTATTTGGTTACCCATTATCGTTTATATAATTTCTGGGATCATTATGCTGTT
CTATTTTAAATATGAAAAAATGGAACCACAGATAAAAAAAGAACTACAAAACCGTCATATTTCATAA

Upstream 100 bases:

>100_bases
ATATCATAGTAGTCAATTAACATTAATTCCTTATTATGCATGGGCGAACCGAGAAGAAGGACAAATGTCTGTTTGGTTGC
ATGAATAGGAGGACACAAAA

Downstream 100 bases:

>100_bases
AATAATACTCTAACAAATAGCAACACACTTAAAAGGTTTAGTTTCAGAAATCAATGAAACTAAACTTTTTTATATAATTA
AATTATTTTTTATAAGTAAA

Product: Na+/xyloside symporter related transporter

Products: NA

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MKNKSDKLPFLEKVSYSFTDMAGNLLYVTISSYILYFYTDVFKISVAGAGLILLIARVVDAISAPVWGSIVDHTHTRWGQ
SRPYFLWLAIPFAIATFLAFTAPNLSGDAKLWYAGITYILAAGVIYTGIQTPITSILPSLTADTDERISANTFRMAGGNI
GAFITSTFCLPLVAFLGQGNDKHGFMLTLGIFGTLAVILLFLAFRNLRERKDVEVKSIPFKDSLKATVGNKPWFILVISF
VIYWIAQADRNGISVYYAKYNLGNEQLTSVFNGLQVLGIIATISIPFVVKVTNKTMTMLIGLAIGAFGQAMMAFAGSNFA
LVIVAWVIGIFGAALACAMPFAMLADTVDFGEWKTGIRASGFLTAVGSAFCIQLGSGFGSFIPSKIMAAAGFVANQKQTA
ESLASIKFCFIWLPIIVYIISGIIMLFYFKYEKMEPQIKKELQNRHIS

Sequences:

>Translated_448_residues
MKNKSDKLPFLEKVSYSFTDMAGNLLYVTISSYILYFYTDVFKISVAGAGLILLIARVVDAISAPVWGSIVDHTHTRWGQ
SRPYFLWLAIPFAIATFLAFTAPNLSGDAKLWYAGITYILAAGVIYTGIQTPITSILPSLTADTDERISANTFRMAGGNI
GAFITSTFCLPLVAFLGQGNDKHGFMLTLGIFGTLAVILLFLAFRNLRERKDVEVKSIPFKDSLKATVGNKPWFILVISF
VIYWIAQADRNGISVYYAKYNLGNEQLTSVFNGLQVLGIIATISIPFVVKVTNKTMTMLIGLAIGAFGQAMMAFAGSNFA
LVIVAWVIGIFGAALACAMPFAMLADTVDFGEWKTGIRASGFLTAVGSAFCIQLGSGFGSFIPSKIMAAAGFVANQKQTA
ESLASIKFCFIWLPIIVYIISGIIMLFYFKYEKMEPQIKKELQNRHIS
>Mature_448_residues
MKNKSDKLPFLEKVSYSFTDMAGNLLYVTISSYILYFYTDVFKISVAGAGLILLIARVVDAISAPVWGSIVDHTHTRWGQ
SRPYFLWLAIPFAIATFLAFTAPNLSGDAKLWYAGITYILAAGVIYTGIQTPITSILPSLTADTDERISANTFRMAGGNI
GAFITSTFCLPLVAFLGQGNDKHGFMLTLGIFGTLAVILLFLAFRNLRERKDVEVKSIPFKDSLKATVGNKPWFILVISF
VIYWIAQADRNGISVYYAKYNLGNEQLTSVFNGLQVLGIIATISIPFVVKVTNKTMTMLIGLAIGAFGQAMMAFAGSNFA
LVIVAWVIGIFGAALACAMPFAMLADTVDFGEWKTGIRASGFLTAVGSAFCIQLGSGFGSFIPSKIMAAAGFVANQKQTA
ESLASIKFCFIWLPIIVYIISGIIMLFYFKYEKMEPQIKKELQNRHIS

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI87082306, Length=461, Percent_Identity=28.8503253796095, Blast_Score=181, Evalue=9e-47,
Organism=Escherichia coli, GI1786466, Length=450, Percent_Identity=28.8888888888889, Blast_Score=178, Evalue=7e-46,
Organism=Escherichia coli, GI1790561, Length=444, Percent_Identity=25.9009009009009, Blast_Score=157, Evalue=9e-40,
Organism=Escherichia coli, GI48994989, Length=450, Percent_Identity=27.7777777777778, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI145693206, Length=450, Percent_Identity=25.3333333333333, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1787902, Length=451, Percent_Identity=28.6031042128603, Blast_Score=147, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48981; Mature: 48981

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKSDKLPFLEKVSYSFTDMAGNLLYVTISSYILYFYTDVFKISVAGAGLILLIARVVD
CCCCCCCCCHHHHHCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AISAPVWGSIVDHTHTRWGQSRPYFLWLAIPFAIATFLAFTAPNLSGDAKLWYAGITYIL
HHCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AAGVIYTGIQTPITSILPSLTADTDERISANTFRMAGGNIGAFITSTFCLPLVAFLGQGN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCC
DKHGFMLTLGIFGTLAVILLFLAFRNLRERKDVEVKSIPFKDSLKATVGNKPWFILVISF
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHCHHHHCCCCCHHHHHHHH
VIYWIAQADRNGISVYYAKYNLGNEQLTSVFNGLQVLGIIATISIPFVVKVTNKTMTMLI
HHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
GLAIGAFGQAMMAFAGSNFALVIVAWVIGIFGAALACAMPFAMLADTVDFGEWKTGIRAS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
GFLTAVGSAFCIQLGSGFGSFIPSKIMAAAGFVANQKQTAESLASIKFCFIWLPIIVYII
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGIIMLFYFKYEKMEPQIKKELQNRHIS
HHHHHHHHHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKNKSDKLPFLEKVSYSFTDMAGNLLYVTISSYILYFYTDVFKISVAGAGLILLIARVVD
CCCCCCCCCHHHHHCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AISAPVWGSIVDHTHTRWGQSRPYFLWLAIPFAIATFLAFTAPNLSGDAKLWYAGITYIL
HHCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AAGVIYTGIQTPITSILPSLTADTDERISANTFRMAGGNIGAFITSTFCLPLVAFLGQGN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCC
DKHGFMLTLGIFGTLAVILLFLAFRNLRERKDVEVKSIPFKDSLKATVGNKPWFILVISF
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHCHHHHCCCCCHHHHHHHH
VIYWIAQADRNGISVYYAKYNLGNEQLTSVFNGLQVLGIIATISIPFVVKVTNKTMTMLI
HHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
GLAIGAFGQAMMAFAGSNFALVIVAWVIGIFGAALACAMPFAMLADTVDFGEWKTGIRAS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
GFLTAVGSAFCIQLGSGFGSFIPSKIMAAAGFVANQKQTAESLASIKFCFIWLPIIVYII
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGIIMLFYFKYEKMEPQIKKELQNRHIS
HHHHHHHHHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]