| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491969
Identifier: 116491969
GI number: 116491969
Start: 182776
End: 184758
Strand: Direct
Name: 116491969
Synonym: PEPE_0155
Alternate gene names: NA
Gene position: 182776-184758 (Clockwise)
Preceding gene: 116491964
Following gene: 116491970
Centisome position: 9.97
GC content: 33.64
Gene sequence:
>1983_bases ATGGCCAATGGACAAAATTTACTTTGTGAGAAAGTAAAAATTACATCAAATTTTTGGAACAGATATCGAAAATTAGTTGC TAAAACTGTTATTCCATATCAATACAATACCTTGAACGACAATATAGACGTTAAATTAAACAAAGATGCATTTGCGGATA TGAGATTCTATGATGGCAAGATTAAAAGTCATGCTATTGAAAATTTGAAAATTGCTGCAGGAATTACACAAGGAAAACAC AGTGGGATGAACTTTCAAGATACGGATGTTTATAAGTGGCTTGAAGCGGCTGCGTATACTTTGAAATATTATCCGAATCA AGATTTACAGAAAAAAACAGATGACATTGTTGAATTAATTGGGCAAGCTCAAGAAGAAGATGGTTATTTATCTACTATTT TCCAGATTAATATGCCAAAACGAAAATTTAAGCGACTACAACAATCGCATGAACTTTATTCTATGGGACACTACATTGAG GCTGGTGTTGCATATTATGAAGCTACTAACAATGGAAAAGCCTTAGAAATCGCAAAAAAAATGGCTGATTGTTTAGATGA AAACTTTGGCCCAGAATCTGGGAAAATCCATGGTGCGGGTGGACATCCTGAAATTGAATTAGCATTAATGCGTCTTTATG AAACAACAAATGAAAAGAAGTATTTAGAGTTAACTAAGTACTTTGTTTGCGAAAGAGGAAAAGATCCTGAATTCTATGAT AAGCAAAACATTGAGGATGGGATTGATAATGACTTTTGGCCAGAATTAAAAGAATATGGTGAAGGTTATTATTTTGCGGA TAAACCAGTTACAGAACAAGATACTGCGCACGGTCATGCAGTAAGATGTGTATATTTCTGTGTAGGATTAGCACATCTTG CCAGAGTAACTAGAGACAAAGAATTATTAGATGCCTCTAAGAGATTGTGGAAAGATATTGTAAAAAAACAAATGTACATT ACAGGAAATGTGGGACAAACACAACGTGGCGAAGCTTTTACAACAGATTACGACCTTCCAAACGATACAGTATATGGAGA AACCTGTGCTAGTGTAGCAATGACTTTCTTTGCAAAGCAAATGATTGCAGATAACTTTAATAGCGAATATGCCGATGTAA TTGAAAAAGAAATTTTTAACGGTGCTTTAAGTGGAATGTCGATTGACGGTACTAATTATTTTTATGTTAATCCTCTTTTT ATGAACCCAATTGAAAGTAAAGATGGGCATGATAAAAAACATATTCTAACTCGCCGTCAACCATGGTTTGGTACAGCATG TTGTCCAGCAAATATTACACGTTTAATTGCTTCACTTGATCAATATTTATATGAGATCAAAGGAGATACAATCTTAGCCC ATCAATACATTGCTAATATAGCTAAATTTAGTGATGACATCATAATTGAACAGGAAAGTAATTTGCCTTGGGAAGGTGAA GTTGTTTTTAATATTGAAAACCCTAATAAAAAAGATTTTAAATTTGCATTGAGAATTCCTAATTGGAGTAAAAACAATTT CAAAATTTATGTTGATAATAAAGCGATCAAGCCCAATGTTACTGAGGGTGTATGTTATTTAGACATTAAGGATAGTAGCG TGAAGGTTACCCTAGTGTTAGACATGGATACTCACATAATCAGGGCTAATGAAAAAGTTAGACAGGATATTGACCAAGTA GCAGTACAACGGGGACCAATCGTGTATTGTGCAGAAAGTGCTGATAATAAGGATGATCTTTGGGATTACAAATTGGAAGA AGAACCACAATTTTCTTTTAGATACGAAAAAGATTTATTAGGCGGAGTAGGTAAGCTCATTACTAATGATGTAAAAGTGT TAAAGAAAGAAGAATTCGATGATGGTGAATTGTACTCATTTGATAAGAAGAATAAATATCATAGTAGTCAATTAACATTA ATTCCTTATTATGCATGGGCGAACCGAGAAGAAGGACAAATGTCTGTTTGGTTGCATGAATAG
Upstream 100 bases:
>100_bases TACCGACATTTCTATTGTAACATTCTATTATAATCTATAAGAAAGCGCTTTTACTAGTAAATATGGTTTTTTGTATTTAT ATATTTGGAGGAAATTAATT
Downstream 100 bases:
>100_bases GAGGACACAAAAATGAAAAATAAAAGTGATAAATTACCATTTTTGGAAAAGGTCAGCTATTCATTTACGGATATGGCAGG AAATTTATTGTACGTAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MANGQNLLCEKVKITSNFWNRYRKLVAKTVIPYQYNTLNDNIDVKLNKDAFADMRFYDGKIKSHAIENLKIAAGITQGKH SGMNFQDTDVYKWLEAAAYTLKYYPNQDLQKKTDDIVELIGQAQEEDGYLSTIFQINMPKRKFKRLQQSHELYSMGHYIE AGVAYYEATNNGKALEIAKKMADCLDENFGPESGKIHGAGGHPEIELALMRLYETTNEKKYLELTKYFVCERGKDPEFYD KQNIEDGIDNDFWPELKEYGEGYYFADKPVTEQDTAHGHAVRCVYFCVGLAHLARVTRDKELLDASKRLWKDIVKKQMYI TGNVGQTQRGEAFTTDYDLPNDTVYGETCASVAMTFFAKQMIADNFNSEYADVIEKEIFNGALSGMSIDGTNYFYVNPLF MNPIESKDGHDKKHILTRRQPWFGTACCPANITRLIASLDQYLYEIKGDTILAHQYIANIAKFSDDIIIEQESNLPWEGE VVFNIENPNKKDFKFALRIPNWSKNNFKIYVDNKAIKPNVTEGVCYLDIKDSSVKVTLVLDMDTHIIRANEKVRQDIDQV AVQRGPIVYCAESADNKDDLWDYKLEEEPQFSFRYEKDLLGGVGKLITNDVKVLKKEEFDDGELYSFDKKNKYHSSQLTL IPYYAWANREEGQMSVWLHE
Sequences:
>Translated_660_residues MANGQNLLCEKVKITSNFWNRYRKLVAKTVIPYQYNTLNDNIDVKLNKDAFADMRFYDGKIKSHAIENLKIAAGITQGKH SGMNFQDTDVYKWLEAAAYTLKYYPNQDLQKKTDDIVELIGQAQEEDGYLSTIFQINMPKRKFKRLQQSHELYSMGHYIE AGVAYYEATNNGKALEIAKKMADCLDENFGPESGKIHGAGGHPEIELALMRLYETTNEKKYLELTKYFVCERGKDPEFYD KQNIEDGIDNDFWPELKEYGEGYYFADKPVTEQDTAHGHAVRCVYFCVGLAHLARVTRDKELLDASKRLWKDIVKKQMYI TGNVGQTQRGEAFTTDYDLPNDTVYGETCASVAMTFFAKQMIADNFNSEYADVIEKEIFNGALSGMSIDGTNYFYVNPLF MNPIESKDGHDKKHILTRRQPWFGTACCPANITRLIASLDQYLYEIKGDTILAHQYIANIAKFSDDIIIEQESNLPWEGE VVFNIENPNKKDFKFALRIPNWSKNNFKIYVDNKAIKPNVTEGVCYLDIKDSSVKVTLVLDMDTHIIRANEKVRQDIDQV AVQRGPIVYCAESADNKDDLWDYKLEEEPQFSFRYEKDLLGGVGKLITNDVKVLKKEEFDDGELYSFDKKNKYHSSQLTL IPYYAWANREEGQMSVWLHE >Mature_659_residues ANGQNLLCEKVKITSNFWNRYRKLVAKTVIPYQYNTLNDNIDVKLNKDAFADMRFYDGKIKSHAIENLKIAAGITQGKHS GMNFQDTDVYKWLEAAAYTLKYYPNQDLQKKTDDIVELIGQAQEEDGYLSTIFQINMPKRKFKRLQQSHELYSMGHYIEA GVAYYEATNNGKALEIAKKMADCLDENFGPESGKIHGAGGHPEIELALMRLYETTNEKKYLELTKYFVCERGKDPEFYDK QNIEDGIDNDFWPELKEYGEGYYFADKPVTEQDTAHGHAVRCVYFCVGLAHLARVTRDKELLDASKRLWKDIVKKQMYIT GNVGQTQRGEAFTTDYDLPNDTVYGETCASVAMTFFAKQMIADNFNSEYADVIEKEIFNGALSGMSIDGTNYFYVNPLFM NPIESKDGHDKKHILTRRQPWFGTACCPANITRLIASLDQYLYEIKGDTILAHQYIANIAKFSDDIIIEQESNLPWEGEV VFNIENPNKKDFKFALRIPNWSKNNFKIYVDNKAIKPNVTEGVCYLDIKDSSVKVTLVLDMDTHIIRANEKVRQDIDQVA VQRGPIVYCAESADNKDDLWDYKLEEEPQFSFRYEKDLLGGVGKLITNDVKVLKKEEFDDGELYSFDKKNKYHSSQLTLI PYYAWANREEGQMSVWLHE
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76057; Mature: 75925
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGQNLLCEKVKITSNFWNRYRKLVAKTVIPYQYNTLNDNIDVKLNKDAFADMRFYDGK CCCCCCEEHHHEEHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHCCCHHCCCC IKSHAIENLKIAAGITQGKHSGMNFQDTDVYKWLEAAAYTLKYYPNQDLQKKTDDIVELI HHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHH GQAQEEDGYLSTIFQINMPKRKFKRLQQSHELYSMGHYIEAGVAYYEATNNGKALEIAKK HCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHH MADCLDENFGPESGKIHGAGGHPEIELALMRLYETTNEKKYLELTKYFVCERGKDPEFYD HHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC KQNIEDGIDNDFWPELKEYGEGYYFADKPVTEQDTAHGHAVRCVYFCVGLAHLARVTRDK CCCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELLDASKRLWKDIVKKQMYITGNVGQTQRGEAFTTDYDLPNDTVYGETCASVAMTFFAKQ HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH MIADNFNSEYADVIEKEIFNGALSGMSIDGTNYFYVNPLFMNPIESKDGHDKKHILTRRQ HHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCEEEECCEEECCCCCCCCCCHHHHHHCCC PWFGTACCPANITRLIASLDQYLYEIKGDTILAHQYIANIAKFSDDIIIEQESNLPWEGE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCE VVFNIENPNKKDFKFALRIPNWSKNNFKIYVDNKAIKPNVTEGVCYLDIKDSSVKVTLVL EEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEE DMDTHIIRANEKVRQDIDQVAVQRGPIVYCAESADNKDDLWDYKLEEEPQFSFRYEKDLL ECCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEHHHHH GGVGKLITNDVKVLKKEEFDDGELYSFDKKNKYHSSQLTLIPYYAWANREEGQMSVWLHE HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEC >Mature Secondary Structure ANGQNLLCEKVKITSNFWNRYRKLVAKTVIPYQYNTLNDNIDVKLNKDAFADMRFYDGK CCCCCEEHHHEEHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHCCCHHCCCC IKSHAIENLKIAAGITQGKHSGMNFQDTDVYKWLEAAAYTLKYYPNQDLQKKTDDIVELI HHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHH GQAQEEDGYLSTIFQINMPKRKFKRLQQSHELYSMGHYIEAGVAYYEATNNGKALEIAKK HCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHH MADCLDENFGPESGKIHGAGGHPEIELALMRLYETTNEKKYLELTKYFVCERGKDPEFYD HHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC KQNIEDGIDNDFWPELKEYGEGYYFADKPVTEQDTAHGHAVRCVYFCVGLAHLARVTRDK CCCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELLDASKRLWKDIVKKQMYITGNVGQTQRGEAFTTDYDLPNDTVYGETCASVAMTFFAKQ HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH MIADNFNSEYADVIEKEIFNGALSGMSIDGTNYFYVNPLFMNPIESKDGHDKKHILTRRQ HHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCEEEECCEEECCCCCCCCCCHHHHHHCCC PWFGTACCPANITRLIASLDQYLYEIKGDTILAHQYIANIAKFSDDIIIEQESNLPWEGE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCE VVFNIENPNKKDFKFALRIPNWSKNNFKIYVDNKAIKPNVTEGVCYLDIKDSSVKVTLVL EEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEE DMDTHIIRANEKVRQDIDQVAVQRGPIVYCAESADNKDDLWDYKLEEEPQFSFRYEKDLL ECCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEHHHHH GGVGKLITNDVKVLKKEEFDDGELYSFDKKNKYHSSQLTLIPYYAWANREEGQMSVWLHE HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA