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The map label for this gene is yfgF [C]

Identifier: 116491920

GI number: 116491920

Start: 111311

End: 112117

Strand: Direct

Name: yfgF [C]

Synonym: PEPE_0103

Alternate gene names: 116491920

Gene position: 111311-112117 (Clockwise)

Preceding gene: 116491919

Following gene: 116491921

Centisome position: 6.07

GC content: 40.4

Gene sequence:

>807_bases
ATGACACTAGAAAAACTTGAAATATATTTATGGTGGATTACAGTGCTGACGGCGGCTATCACTATTGGAATTATCGGTGG
ATATTACTGGTGGACCCGGAATAAGGGGAGCGATTATTTACGGAATGATGAAATCCCACTTCGTTATTTTATCCAAAAAC
AAGTTGATCGTAAGGGAAATACCATTGGCTACGAGTGCCTATTGCGCACGCAAAATGAAGCGGGACAGTGGGTTTTGCCA
CGTGATTTTGAATCCCTACCACTGCAACGCGTGATTAGCTTACTGGAGACGACTTTCCAATCTCTAGCCGATGAGCATGT
AACCCTTTCTATTAAATTAACTTACAACCAAATTATGAGTCCGGCTTTTGAATACTTTGTGCGGTGGGCAATTGCGAAAA
TTGAGCCACTTAATTTAGCTATTGAACTTTCAATCCATGAAATGAATCGGCTAACCAATCGCCGTCTTTTTAAAAGAAGA
ATCCAGATTGGGCGTAGCTATGGAGTTCAATTCACGATTAATAATGTAGGTTCATCTTTAAATGATTTGAAACATATTGA
GTGGTTACTAAGCGAAATTGATATTTTAAAGGCTTCCATGAGTAGTTTTAGAAAGAAAGATCCCAACGAATGGCTCGATC
TTAATCTCCAATTTTGGAATAAGTTGGCCCAAGAAAATGAAATTAAATTGGTTTTAGTGGGAATTGAAAATGAAGCCGAC
GAGGCGTTAGCGGAGCAGCTCCGGATTGATGCGCGCCAAGGCTATCTTTTTGGCAAGCCGGAGGATGTTTACCGAAAGCA
GGTTTAG

Upstream 100 bases:

>100_bases
TTAATAATAAACGGTATCAGTTTAAAAAATATTAAAATCACGCCAAAAGGTAATGCCAATCGTTTTTTTTAGTTTTAAAA
TAAACGGAAAGGTTAACGAT

Downstream 100 bases:

>100_bases
GATGAAAAACGAAAGAGAACGTCAGCAGCTATATACAGATTTGTATTTTGAAAAAGGACACTGGTGGTTGAAAATATGGC
AAACGTTAGTCGCCATTTTC

Product: C-di-GMP-specific phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTLEKLEIYLWWITVLTAAITIGIIGGYYWWTRNKGSDYLRNDEIPLRYFIQKQVDRKGNTIGYECLLRTQNEAGQWVLP
RDFESLPLQRVISLLETTFQSLADEHVTLSIKLTYNQIMSPAFEYFVRWAIAKIEPLNLAIELSIHEMNRLTNRRLFKRR
IQIGRSYGVQFTINNVGSSLNDLKHIEWLLSEIDILKASMSSFRKKDPNEWLDLNLQFWNKLAQENEIKLVLVGIENEAD
EALAEQLRIDARQGYLFGKPEDVYRKQV

Sequences:

>Translated_268_residues
MTLEKLEIYLWWITVLTAAITIGIIGGYYWWTRNKGSDYLRNDEIPLRYFIQKQVDRKGNTIGYECLLRTQNEAGQWVLP
RDFESLPLQRVISLLETTFQSLADEHVTLSIKLTYNQIMSPAFEYFVRWAIAKIEPLNLAIELSIHEMNRLTNRRLFKRR
IQIGRSYGVQFTINNVGSSLNDLKHIEWLLSEIDILKASMSSFRKKDPNEWLDLNLQFWNKLAQENEIKLVLVGIENEAD
EALAEQLRIDARQGYLFGKPEDVYRKQV
>Mature_267_residues
TLEKLEIYLWWITVLTAAITIGIIGGYYWWTRNKGSDYLRNDEIPLRYFIQKQVDRKGNTIGYECLLRTQNEAGQWVLPR
DFESLPLQRVISLLETTFQSLADEHVTLSIKLTYNQIMSPAFEYFVRWAIAKIEPLNLAIELSIHEMNRLTNRRLFKRRI
QIGRSYGVQFTINNVGSSLNDLKHIEWLLSEIDILKASMSSFRKKDPNEWLDLNLQFWNKLAQENEIKLVLVGIENEADE
ALAEQLRIDARQGYLFGKPEDVYRKQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31505; Mature: 31373

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEKLEIYLWWITVLTAAITIGIIGGYYWWTRNKGSDYLRNDEIPLRYFIQKQVDRKGN
CCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC
TIGYECLLRTQNEAGQWVLPRDFESLPLQRVISLLETTFQSLADEHVTLSIKLTYNQIMS
EEEEEEEEEECCCCCCEECCCCHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHH
PAFEYFVRWAIAKIEPLNLAIELSIHEMNRLTNRRLFKRRIQIGRSYGVQFTINNVGSSL
HHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCHH
NDLKHIEWLLSEIDILKASMSSFRKKDPNEWLDLNLQFWNKLAQENEIKLVLVGIENEAD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHCCCCCEEEEEEECCCCHH
EALAEQLRIDARQGYLFGKPEDVYRKQV
HHHHHHHHHHHHCCEECCCCHHHHHCCC
>Mature Secondary Structure 
TLEKLEIYLWWITVLTAAITIGIIGGYYWWTRNKGSDYLRNDEIPLRYFIQKQVDRKGN
CHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC
TIGYECLLRTQNEAGQWVLPRDFESLPLQRVISLLETTFQSLADEHVTLSIKLTYNQIMS
EEEEEEEEEECCCCCCEECCCCHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHH
PAFEYFVRWAIAKIEPLNLAIELSIHEMNRLTNRRLFKRRIQIGRSYGVQFTINNVGSSL
HHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCHH
NDLKHIEWLLSEIDILKASMSSFRKKDPNEWLDLNLQFWNKLAQENEIKLVLVGIENEAD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHCCCCCEEEEEEECCCCHH
EALAEQLRIDARQGYLFGKPEDVYRKQV
HHHHHHHHHHHHCCEECCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA