| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is ytpP [H]
Identifier: 116491919
GI number: 116491919
Start: 110656
End: 110976
Strand: Direct
Name: ytpP [H]
Synonym: PEPE_0102
Alternate gene names: 116491919
Gene position: 110656-110976 (Clockwise)
Preceding gene: 116491918
Following gene: 116491920
Centisome position: 6.04
GC content: 42.06
Gene sequence:
>321_bases ATGAGCACTCAAGCAAATTTAACTAACGAAGAAATTTTTGAAGCAATGAATTCAGGTAAGAAAATGTTATTCTTTACAGC TGGCTGGTGCCCTGATTGTGCCTTCATCAAGCCCGCAATGCCGGACATCATGAAGAAGTACGATCAATATGATTGGATTA CGGTTGACCGTGATGACAATCTAGAAGTTGCTCAACATTTTGGTGTGATGGGTATTCCAAGTTTTATCGCCCTTGAAGAC GGTAAGGAACTCGGCCGTTTTGGTAAAGGTGAACGCCGTACTCCCCAAGAAGTTGAAGAATTCATTCAGGGTATTGCCTA A
Upstream 100 bases:
>100_bases ATTAATTGGTTGTCAAAACGACTGGAAGCTGATAGAATATTTGATATAGATAGCAGCTTACAAAAAGTAAGCTAGTTTTT AATAAAAGGAGCAATTCAAA
Downstream 100 bases:
>100_bases CCATTAAAGTTAATTCTAGCAAGCTGTATAGAAATCGATTTTCGATTACTATACAGCTTTTTTATTTTCTACTTTTTAGT TACTGTGAAACTATGTTAAT
Product: Thiol-disulfide isomerase and thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSTQANLTNEEIFEAMNSGKKMLFFTAGWCPDCAFIKPAMPDIMKKYDQYDWITVDRDDNLEVAQHFGVMGIPSFIALED GKELGRFGKGERRTPQEVEEFIQGIA
Sequences:
>Translated_106_residues MSTQANLTNEEIFEAMNSGKKMLFFTAGWCPDCAFIKPAMPDIMKKYDQYDWITVDRDDNLEVAQHFGVMGIPSFIALED GKELGRFGKGERRTPQEVEEFIQGIA >Mature_105_residues STQANLTNEEIFEAMNSGKKMLFFTAGWCPDCAFIKPAMPDIMKKYDQYDWITVDRDDNLEVAQHFGVMGIPSFIALEDG KELGRFGKGERRTPQEVEEFIQGIA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 12058; Mature: 11927
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQANLTNEEIFEAMNSGKKMLFFTAGWCPDCAFIKPAMPDIMKKYDQYDWITVDRDDN CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCC LEVAQHFGVMGIPSFIALEDGKELGRFGKGERRTPQEVEEFIQGIA HHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure STQANLTNEEIFEAMNSGKKMLFFTAGWCPDCAFIKPAMPDIMKKYDQYDWITVDRDDN CCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCC LEVAQHFGVMGIPSFIALEDGKELGRFGKGERRTPQEVEEFIQGIA HHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]