Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491921

Identifier: 116491921

GI number: 116491921

Start: 112119

End: 112622

Strand: Direct

Name: 116491921

Synonym: PEPE_0104

Alternate gene names: NA

Gene position: 112119-112622 (Clockwise)

Preceding gene: 116491920

Following gene: 116491922

Centisome position: 6.12

GC content: 40.08

Gene sequence:

>504_bases
ATGAAAAACGAAAGAGAACGTCAGCAGCTATATACAGATTTGTATTTTGAAAAAGGACACTGGTGGTTGAAAATATGGCA
AACGTTAGTCGCCATTTTCGGTTGGATGTGTGTGTTTGTTCCTATCATCATCACCGTCACTTCCTTTTGGGCGATTTATA
ATCCCAAGATTCCGCATATCTGGTCTTATAGTGAAGGGATTTTTGAAATTAAATTTATCGGAATCTTATTGGCCTTTGCA
TTTGTCATGGCGAGCTTGTTTGCGACGAGTATGACGATTATTCAAAATCGGCGGCGGGATCGGCTGGCTGAACAGTGGCC
TACCTACAATCCAATTAATCAGCGTCGACGGGAAGATACATTAGAAGCATTTATGGACGCCCGGTTTGGCAGTAAGGAAT
TTCGTGAAAATACCAGGTACTACGAAGTAAAACCAGAACAAAATCTGGATACAGACGAAATTAAAGAAATTTATCGAGCA
TCTAATTTAGACGATCTTGGATAA

Upstream 100 bases:

>100_bases
AATGAAGCCGACGAGGCGTTAGCGGAGCAGCTCCGGATTGATGCGCGCCAAGGCTATCTTTTTGGCAAGCCGGAGGATGT
TTACCGAAAGCAGGTTTAGG

Downstream 100 bases:

>100_bases
GGAGCAAAAATGTCATCAATCTTTATTGATAGTATTTTCAAAGGATCCCTGATTGATACGACCATTAACATTATTCTTTT
GATACTTTGTTTATATCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKNERERQQLYTDLYFEKGHWWLKIWQTLVAIFGWMCVFVPIIITVTSFWAIYNPKIPHIWSYSEGIFEIKFIGILLAFA
FVMASLFATSMTIIQNRRRDRLAEQWPTYNPINQRRREDTLEAFMDARFGSKEFRENTRYYEVKPEQNLDTDEIKEIYRA
SNLDDLG

Sequences:

>Translated_167_residues
MKNERERQQLYTDLYFEKGHWWLKIWQTLVAIFGWMCVFVPIIITVTSFWAIYNPKIPHIWSYSEGIFEIKFIGILLAFA
FVMASLFATSMTIIQNRRRDRLAEQWPTYNPINQRRREDTLEAFMDARFGSKEFRENTRYYEVKPEQNLDTDEIKEIYRA
SNLDDLG
>Mature_167_residues
MKNERERQQLYTDLYFEKGHWWLKIWQTLVAIFGWMCVFVPIIITVTSFWAIYNPKIPHIWSYSEGIFEIKFIGILLAFA
FVMASLFATSMTIIQNRRRDRLAEQWPTYNPINQRRREDTLEAFMDARFGSKEFRENTRYYEVKPEQNLDTDEIKEIYRA
SNLDDLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20153; Mature: 20153

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNERERQQLYTDLYFEKGHWWLKIWQTLVAIFGWMCVFVPIIITVTSFWAIYNPKIPHI
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
WSYSEGIFEIKFIGILLAFAFVMASLFATSMTIIQNRRRDRLAEQWPTYNPINQRRREDT
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LEAFMDARFGSKEFRENTRYYEVKPEQNLDTDEIKEIYRASNLDDLG
HHHHHHHCCCCHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNERERQQLYTDLYFEKGHWWLKIWQTLVAIFGWMCVFVPIIITVTSFWAIYNPKIPHI
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
WSYSEGIFEIKFIGILLAFAFVMASLFATSMTIIQNRRRDRLAEQWPTYNPINQRRREDT
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LEAFMDARFGSKEFRENTRYYEVKPEQNLDTDEIKEIYRASNLDDLG
HHHHHHHCCCCHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA