Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491882

Identifier: 116491882

GI number: 116491882

Start: 67597

End: 69249

Strand: Direct

Name: 116491882

Synonym: PEPE_0064

Alternate gene names: NA

Gene position: 67597-69249 (Clockwise)

Preceding gene: 116491881

Following gene: 116491883

Centisome position: 3.69

GC content: 36.96

Gene sequence:

>1653_bases
ATGTTTTATATTATGCCGGCCTGGGAGAATGAAGTCAGCGAATTAAATCGGGATTTACTAAAAAATCTGACTAATGTATT
CGTTGGTGGTAAAAAAAGCGTGAAGCTCGCGGTGTTAAATTTTTTACCCAACCTAAGATATCTTTTACATGTCAATGGAT
TAACTAATTATGAATACTGGAACATTTGGGATGCGATTTTGGGGATAGAAAGAGTTGATGGAATGCCACTAGGACCAGAA
GCTTTAGACTTACCTCAAGGGGTTCGTTTAATCAATGCTATGACTTCAATGGATGCCTATGAGGGATCTAAATTATATGC
CCGAATTATTAGAAGTTCTGAAGGATATCTTAGTGAGGTTCAGTTTATGAATCCTCAAAATCGCCATACCGATGTTTATG
ACGATCGTGGATTCAAAGTATGCACTAATTATTATGAAAATGAAGAAGTAGTCCGACAAGAATGGTTCAATGAGTGCAAT
CAACTAATTGTTCGTTATGAACCTAAGGCCAAGGTGGCTGTTCAAATTCTAGGTAATTATTCTAATTTCGAGAAAAGGCA
GTATAAAACTTTAAACGAACTATTAATGGAATTTGTAAATTCATTTTTTGAAGAGCACTTTGATCCCACTCAGGACCGGT
TAATTGCTAGTACTAACTTAAAGATTAGGCCGCTGATGGTCGAGATTCAAAACCGGTTACCAGTAACTTATTTATTGGAC
CATCTGGGCCCTATGGATACTACCACCGTGGAAACATTGCAACCTCAAATTCAGGGAGCTTTTAAATTTGTGGTTCCTAA
CTATGTGATATTCCAACAAATTAAATCTAGCGTAGCTGAGCCGGCTCAAAAGGTTTTAAAACTAGGTTATCCGTACGGAA
CTGAGAATCGACTTGGAAACAGTAATGAAGAAAGTAAAATGTTTATTTACTGGCATATAGATGAATCAACTAATGATACG
ACGTGCTCGCAGTTTGCGGAAAAGCTTATTGATTATTCCTTAGAACACGAAAATGTTGGTTTACAAGTAGCAGCGCTTAA
TGATCGTCAAGCTAATCTCGTTTTTAATTATCTGTGCCAAGCTCTTAAAAATAAATATACCTTTTTAGATCTGGAGCAAG
ACCAAGACTTAATTTGGAAGATTGTGTTTGGTAGAGAGGACACAGATGCAATTGGAAAGCTATTAATGCAGTTAAAATTT
CGTTTAGGCATGAATTTGAAGCATGACCCGGAGACCAATCCGCAAAAATTAGCGGATTCCGCTCGATTTAAAAAGATTAA
CTGGAAAAAGGTAATGGAAGACATTACTGAAACGATCATCCGCGTTAATTCACGAGACAATGAAATTTATCGCAATTTAG
CTCGATCACGGGTGTTGGTCGATGTCGGTAGTCCATATAATACTAGAATGCAATTTAATGCGATTAGCGCCGGTATTCCA
CAGATTGTTAACGTTGATAGTCCGTTCATTATTAATAGAAAGAATGGATGGATTATCAATGAAAAACAGAGTCTCAGCCA
AGGGTTAGATTTTTATCTACAAGAGCTGGGTAATTGGAATAAATCCTTAGTTGCGACAACTAAGTATATGGAACAACTAA
CACTTAAGCGCCAAGCCGACTGGTGGGAAAGAAGAACTAAGTATGAAAAATAA

Upstream 100 bases:

>100_bases
ATTTTAATTACCATCATTGATACAACGATGGATCAATTTAAGACGATGTATCTAAGGATGCACTATGATCTTTTATAGAA
AGCCACGGGGGAACTAACTA

Downstream 100 bases:

>100_bases
ACTCATTCATTTAGGTTTGCCAATACCAGGGTTGTCTGAGCAACTGAAGGAGAATTTTGACTATATTGATATCCCATTTG
AAAAACTTTGGGAACCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Accessory Secretory ; Accessory Secretory Protein; Accessory Secretory

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MFYIMPAWENEVSELNRDLLKNLTNVFVGGKKSVKLAVLNFLPNLRYLLHVNGLTNYEYWNIWDAILGIERVDGMPLGPE
ALDLPQGVRLINAMTSMDAYEGSKLYARIIRSSEGYLSEVQFMNPQNRHTDVYDDRGFKVCTNYYENEEVVRQEWFNECN
QLIVRYEPKAKVAVQILGNYSNFEKRQYKTLNELLMEFVNSFFEEHFDPTQDRLIASTNLKIRPLMVEIQNRLPVTYLLD
HLGPMDTTTVETLQPQIQGAFKFVVPNYVIFQQIKSSVAEPAQKVLKLGYPYGTENRLGNSNEESKMFIYWHIDESTNDT
TCSQFAEKLIDYSLEHENVGLQVAALNDRQANLVFNYLCQALKNKYTFLDLEQDQDLIWKIVFGREDTDAIGKLLMQLKF
RLGMNLKHDPETNPQKLADSARFKKINWKKVMEDITETIIRVNSRDNEIYRNLARSRVLVDVGSPYNTRMQFNAISAGIP
QIVNVDSPFIINRKNGWIINEKQSLSQGLDFYLQELGNWNKSLVATTKYMEQLTLKRQADWWERRTKYEK

Sequences:

>Translated_550_residues
MFYIMPAWENEVSELNRDLLKNLTNVFVGGKKSVKLAVLNFLPNLRYLLHVNGLTNYEYWNIWDAILGIERVDGMPLGPE
ALDLPQGVRLINAMTSMDAYEGSKLYARIIRSSEGYLSEVQFMNPQNRHTDVYDDRGFKVCTNYYENEEVVRQEWFNECN
QLIVRYEPKAKVAVQILGNYSNFEKRQYKTLNELLMEFVNSFFEEHFDPTQDRLIASTNLKIRPLMVEIQNRLPVTYLLD
HLGPMDTTTVETLQPQIQGAFKFVVPNYVIFQQIKSSVAEPAQKVLKLGYPYGTENRLGNSNEESKMFIYWHIDESTNDT
TCSQFAEKLIDYSLEHENVGLQVAALNDRQANLVFNYLCQALKNKYTFLDLEQDQDLIWKIVFGREDTDAIGKLLMQLKF
RLGMNLKHDPETNPQKLADSARFKKINWKKVMEDITETIIRVNSRDNEIYRNLARSRVLVDVGSPYNTRMQFNAISAGIP
QIVNVDSPFIINRKNGWIINEKQSLSQGLDFYLQELGNWNKSLVATTKYMEQLTLKRQADWWERRTKYEK
>Mature_550_residues
MFYIMPAWENEVSELNRDLLKNLTNVFVGGKKSVKLAVLNFLPNLRYLLHVNGLTNYEYWNIWDAILGIERVDGMPLGPE
ALDLPQGVRLINAMTSMDAYEGSKLYARIIRSSEGYLSEVQFMNPQNRHTDVYDDRGFKVCTNYYENEEVVRQEWFNECN
QLIVRYEPKAKVAVQILGNYSNFEKRQYKTLNELLMEFVNSFFEEHFDPTQDRLIASTNLKIRPLMVEIQNRLPVTYLLD
HLGPMDTTTVETLQPQIQGAFKFVVPNYVIFQQIKSSVAEPAQKVLKLGYPYGTENRLGNSNEESKMFIYWHIDESTNDT
TCSQFAEKLIDYSLEHENVGLQVAALNDRQANLVFNYLCQALKNKYTFLDLEQDQDLIWKIVFGREDTDAIGKLLMQLKF
RLGMNLKHDPETNPQKLADSARFKKINWKKVMEDITETIIRVNSRDNEIYRNLARSRVLVDVGSPYNTRMQFNAISAGIP
QIVNVDSPFIINRKNGWIINEKQSLSQGLDFYLQELGNWNKSLVATTKYMEQLTLKRQADWWERRTKYEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64211; Mature: 64211

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYIMPAWENEVSELNRDLLKNLTNVFVGGKKSVKLAVLNFLPNLRYLLHVNGLTNYEYW
CEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHH
NIWDAILGIERVDGMPLGPEALDLPQGVRLINAMTSMDAYEGSKLYARIIRSSEGYLSEV
HHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
QFMNPQNRHTDVYDDRGFKVCTNYYENEEVVRQEWFNECNQLIVRYEPKAKVAVQILGNY
HHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCC
SNFEKRQYKTLNELLMEFVNSFFEEHFDPTQDRLIASTNLKIRPLMVEIQNRLPVTYLLD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEEECCCEEEEHHEEHHHCCCHHHHHH
HLGPMDTTTVETLQPQIQGAFKFVVPNYVIFQQIKSSVAEPAQKVLKLGYPYGTENRLGN
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SNEESKMFIYWHIDESTNDTTCSQFAEKLIDYSLEHENVGLQVAALNDRQANLVFNYLCQ
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH
ALKNKYTFLDLEQDQDLIWKIVFGREDTDAIGKLLMQLKFRLGMNLKHDPETNPQKLADS
HHCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ARFKKINWKKVMEDITETIIRVNSRDNEIYRNLARSRVLVDVGSPYNTRMQFNAISAGIP
HHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCEEEEECCCCCCCEEEEEEHHCCCC
QIVNVDSPFIINRKNGWIINEKQSLSQGLDFYLQELGNWNKSLVATTKYMEQLTLKRQAD
CEEECCCCEEEECCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
WWERRTKYEK
HHHHHHCCCC
>Mature Secondary Structure
MFYIMPAWENEVSELNRDLLKNLTNVFVGGKKSVKLAVLNFLPNLRYLLHVNGLTNYEYW
CEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHH
NIWDAILGIERVDGMPLGPEALDLPQGVRLINAMTSMDAYEGSKLYARIIRSSEGYLSEV
HHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
QFMNPQNRHTDVYDDRGFKVCTNYYENEEVVRQEWFNECNQLIVRYEPKAKVAVQILGNY
HHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCC
SNFEKRQYKTLNELLMEFVNSFFEEHFDPTQDRLIASTNLKIRPLMVEIQNRLPVTYLLD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEEECCCEEEEHHEEHHHCCCHHHHHH
HLGPMDTTTVETLQPQIQGAFKFVVPNYVIFQQIKSSVAEPAQKVLKLGYPYGTENRLGN
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SNEESKMFIYWHIDESTNDTTCSQFAEKLIDYSLEHENVGLQVAALNDRQANLVFNYLCQ
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH
ALKNKYTFLDLEQDQDLIWKIVFGREDTDAIGKLLMQLKFRLGMNLKHDPETNPQKLADS
HHCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ARFKKINWKKVMEDITETIIRVNSRDNEIYRNLARSRVLVDVGSPYNTRMQFNAISAGIP
HHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCEEEEECCCCCCCEEEEEEHHCCCC
QIVNVDSPFIINRKNGWIINEKQSLSQGLDFYLQELGNWNKSLVATTKYMEQLTLKRQAD
CEEECCCCEEEECCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
WWERRTKYEK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA