| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491854
Identifier: 116491854
GI number: 116491854
Start: 34048
End: 34506
Strand: Reverse
Name: 116491854
Synonym: PEPE_0036
Alternate gene names: NA
Gene position: 34506-34048 (Counterclockwise)
Preceding gene: 116491856
Following gene: 116491852
Centisome position: 1.88
GC content: 33.55
Gene sequence:
>459_bases ATGACAGAAGAAACTTATCAAAAGTGGCTACAGGATTTTAAACAACTTCGTTTGCCTGAATTTAAAGACTTTCCAGACCT TGATTTATACATGGACCAAGTCATTCAAGAAGTTAACCGCTACTTGACACCAATCTTAGGTACTAAAATCACCAAAACTA TGGTCAATAGTTACGTCAAAATGGAAATTGTAACGCGCCCTACTAAAAAGAAGTACAACGCTAGCCACATTGCTTCTATT ATGATGATTAGCATTTTTAAAACTGCTTTTGCGCTAGATACTATCAAACAATTGCTAGCTACAGATGATATTGAAACCTA CTTCAACCAATTTATTAGGCGTTTTAATCATGAAATCAGCCATTTAGAAGAACCCGTCGCGTCATTTTCTCAATTAGAAA TAGCTATTCGAACCGTTTTATATAAGCTTATCTTAGAGCAAAAAATTGTAAAAAAATAA
Upstream 100 bases:
>100_bases TTGTTGGTGCCATTATACATAGAATCGTATTCTACGTAAAGCAAAATGCATATCAATTTGAATAAAATTTATGCTATGAT ACTAGCTGGAGGATTTATTG
Downstream 100 bases:
>100_bases CTACTAACTTTTGAGGTTAGTAGTTTTTTTGACTTTTATTTATCGCCTGGAAGGCTTAGTAATTGTGGTTTACTGAAGAA ATAACCTTGGCGGCGGCTAA
Product: BS_ykrK family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTEETYQKWLQDFKQLRLPEFKDFPDLDLYMDQVIQEVNRYLTPILGTKITKTMVNSYVKMEIVTRPTKKKYNASHIASI MMISIFKTAFALDTIKQLLATDDIETYFNQFIRRFNHEISHLEEPVASFSQLEIAIRTVLYKLILEQKIVKK
Sequences:
>Translated_152_residues MTEETYQKWLQDFKQLRLPEFKDFPDLDLYMDQVIQEVNRYLTPILGTKITKTMVNSYVKMEIVTRPTKKKYNASHIASI MMISIFKTAFALDTIKQLLATDDIETYFNQFIRRFNHEISHLEEPVASFSQLEIAIRTVLYKLILEQKIVKK >Mature_151_residues TEETYQKWLQDFKQLRLPEFKDFPDLDLYMDQVIQEVNRYLTPILGTKITKTMVNSYVKMEIVTRPTKKKYNASHIASIM MISIFKTAFALDTIKQLLATDDIETYFNQFIRRFNHEISHLEEPVASFSQLEIAIRTVLYKLILEQKIVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18059; Mature: 17928
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEETYQKWLQDFKQLRLPEFKDFPDLDLYMDQVIQEVNRYLTPILGTKITKTMVNSYVK CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEIVTRPTKKKYNASHIASIMMISIFKTAFALDTIKQLLATDDIETYFNQFIRRFNHEIS HHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH HLEEPVASFSQLEIAIRTVLYKLILEQKIVKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEETYQKWLQDFKQLRLPEFKDFPDLDLYMDQVIQEVNRYLTPILGTKITKTMVNSYVK CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEIVTRPTKKKYNASHIASIMMISIFKTAFALDTIKQLLATDDIETYFNQFIRRFNHEIS HHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH HLEEPVASFSQLEIAIRTVLYKLILEQKIVKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA