| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491856
Identifier: 116491856
GI number: 116491856
Start: 35344
End: 35877
Strand: Reverse
Name: 116491856
Synonym: PEPE_0038
Alternate gene names: NA
Gene position: 35877-35344 (Counterclockwise)
Preceding gene: 116491858
Following gene: 116491854
Centisome position: 1.96
GC content: 38.39
Gene sequence:
>534_bases ATGACAACATCTTACTTGCGCAAAGCAACTAAGGCTGACTTGCCAGCCATTTTAGAAATAATTGATGCAGCCAAAGCTTA CCTTAAGGAACAAGGAATTAATCAGTGGCAAGCTGGCTACCCTACTAACCAAGATATTGAAAAAGATATTGAACAAAAAA TTAGCTATGTTTTAATGGTCGACGGTGAAATTGCCGCCACTGCTGCTTTATGGCCTGATCGAGACGTAAATTACGATGAC ATGTTGGAAGGAAGTTGGAGAGGTAATCCGGAAGATACTTACATGTCTATTCATCGAATTGCGATGTCTTCTAAATTCCG CGGTCAACGGCTCTCTGAAAAAATGATGTCCGGACTTTTCACAATTAGTTCCGAACTAGGCTACAATGAACTCCGTATTG ATACCCACCCCAAAAATAAAGGTATGCAAAAAGTTATTGCTAATAATGGTTTCGAATATCGTGGCATTATCGACTTCAAT GACGAAAATGAAGTTGATACAACCCGTTTTGCTTATCAATTATATCTAAATTAA
Upstream 100 bases:
>100_bases GAGAAATAACGAATACGTTTTCATCTATAAAAAGTAATGACAACTCTTTTCATTTACGTTAAAATAGCATTTCTGATAAA AAAATAAATGGAGAATAATT
Downstream 100 bases:
>100_bases TTAGTATATTTTAAAAGAGATTTCAGTCGATACTGAAATCTCTTTTTGTTGTGTTTTGATCTGATTACTTCCTATATATT CAAATAAATTGATCCAAACA
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Family Protein; Acetyltransferase Gnat Family; Histone Acetyltransferase; Gcn5-Related N-Acetyltransferase; Serine O-Acetyltransferase CysE; Serine O-Acetyltransferase; GNAT Family N-Acetyltransferase; Peptidyl-TRNA Hydrolase; GNAT Family Acetyltransferase
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTTSYLRKATKADLPAILEIIDAAKAYLKEQGINQWQAGYPTNQDIEKDIEQKISYVLMVDGEIAATAALWPDRDVNYDD MLEGSWRGNPEDTYMSIHRIAMSSKFRGQRLSEKMMSGLFTISSELGYNELRIDTHPKNKGMQKVIANNGFEYRGIIDFN DENEVDTTRFAYQLYLN
Sequences:
>Translated_177_residues MTTSYLRKATKADLPAILEIIDAAKAYLKEQGINQWQAGYPTNQDIEKDIEQKISYVLMVDGEIAATAALWPDRDVNYDD MLEGSWRGNPEDTYMSIHRIAMSSKFRGQRLSEKMMSGLFTISSELGYNELRIDTHPKNKGMQKVIANNGFEYRGIIDFN DENEVDTTRFAYQLYLN >Mature_176_residues TTSYLRKATKADLPAILEIIDAAKAYLKEQGINQWQAGYPTNQDIEKDIEQKISYVLMVDGEIAATAALWPDRDVNYDDM LEGSWRGNPEDTYMSIHRIAMSSKFRGQRLSEKMMSGLFTISSELGYNELRIDTHPKNKGMQKVIANNGFEYRGIIDFND ENEVDTTRFAYQLYLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20308; Mature: 20177
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSYLRKATKADLPAILEIIDAAKAYLKEQGINQWQAGYPTNQDIEKDIEQKISYVLMV CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCEEEEEE DGEIAATAALWPDRDVNYDDMLEGSWRGNPEDTYMSIHRIAMSSKFRGQRLSEKMMSGLF CCCEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TISSELGYNELRIDTHPKNKGMQKVIANNGFEYRGIIDFNDENEVDTTRFAYQLYLN HHHHCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCHHEEEEEEEEC >Mature Secondary Structure TTSYLRKATKADLPAILEIIDAAKAYLKEQGINQWQAGYPTNQDIEKDIEQKISYVLMV CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCEEEEEE DGEIAATAALWPDRDVNYDDMLEGSWRGNPEDTYMSIHRIAMSSKFRGQRLSEKMMSGLF CCCEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TISSELGYNELRIDTHPKNKGMQKVIANNGFEYRGIIDFNDENEVDTTRFAYQLYLN HHHHCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA