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The map label for this gene is 116332540

Identifier: 116332540

GI number: 116332540

Start: 122870

End: 123721

Strand: Reverse

Name: 116332540

Synonym: LBJ_4106

Alternate gene names: NA

Gene position: 123721-122870 (Counterclockwise)

Preceding gene: 116332541

Following gene: 116332539

Centisome position: 41.27

GC content: 40.02

Gene sequence:

>852_bases
ATGAAAGAAAAAATAGACCAACTTTTTTTAAACGACGCTCAACTTCCTAGAATTTCGTCCGTAGTTACGAAAGTAATGCA
AATGGTGCAAAAGCAAGATGTAGCGATTCCGGATCTAGCAAAGGAAATTTCACACGATCCGGGTTTGACAGCCGATGTAA
TTAAACTTTCCAATTCGGCCTATTATCGAGCGGCAAAACCAATCAAAACCGTACAAGAATCTCTGATGACTTTAGGAATC
AAAACGGTAAAGGATATCATCCTACTAACCGCGGCGAGAGGGATTCTTAAAAAAGATCTGAAAGGTTATCAGATAGAAGC
GGAAGATAACTGGATTCATTCTCTTACAGTAGCGGAACTTTCCAAAAGAATCTGTGAGCAGAAAAAACTTAAAATCGGAT
TGGACCTCGCGTTTACTGGCGGCCTTTTACACAATATAGGAAAAGTGATTCTTGCCGATTTTTTTCCCGCCGTGATCGCC
AACCTTAGGGAAGAATTAAAAATTCATTCTGTTTCGTTCGAAGAATTAGAAAGAAAACATTTCGGATATTCCCACGAAGA
AGTGGGTGAGAAATTATTAGAAAAATGGAATTTTCCAAAAGAATTGATTCATGTGGCACGGAACTACAGCCAACCCGAAA
ATGAAAAAGAATTTCAGGAATTGGTATCCGTAGTTCATATAGCTCATTCGATTTCCATAGCAGCGGGAGTGGGAATTGAC
ATTGCAGGCTTATCCACCCCGATTTCCAATAAGGCCTTGCAAATGATAGGAACTACCGACTCTGATGTACAAATGTACTA
TACGACCCTTCCGGAAATACAGAAACACATCCGCGAGTTGATTCAGGCTTGA

Upstream 100 bases:

>100_bases
GAACGACGGTAGAACTATCAGCTTGTATTTGGACGACGGCCGGGTTCTTTTAAAAAAAGGCGGGTTTGAAAAGTATCTCT
ACAAGGTCAGGTAAGAAAAG

Downstream 100 bases:

>100_bases
GAAAAAATTTTGCTCTGATCGGTCCGAGAGGGGTCGGAAAATCCAAAATTTCTCGCAAGCTTTCTAAAATAACAGGAATG
CCCGTAGTATCTACGGACAT

Product: Signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKEKIDQLFLNDAQLPRISSVVTKVMQMVQKQDVAIPDLAKEISHDPGLTADVIKLSNSAYYRAAKPIKTVQESLMTLGI
KTVKDIILLTAARGILKKDLKGYQIEAEDNWIHSLTVAELSKRICEQKKLKIGLDLAFTGGLLHNIGKVILADFFPAVIA
NLREELKIHSVSFEELERKHFGYSHEEVGEKLLEKWNFPKELIHVARNYSQPENEKEFQELVSVVHIAHSISIAAGVGID
IAGLSTPISNKALQMIGTTDSDVQMYYTTLPEIQKHIRELIQA

Sequences:

>Translated_283_residues
MKEKIDQLFLNDAQLPRISSVVTKVMQMVQKQDVAIPDLAKEISHDPGLTADVIKLSNSAYYRAAKPIKTVQESLMTLGI
KTVKDIILLTAARGILKKDLKGYQIEAEDNWIHSLTVAELSKRICEQKKLKIGLDLAFTGGLLHNIGKVILADFFPAVIA
NLREELKIHSVSFEELERKHFGYSHEEVGEKLLEKWNFPKELIHVARNYSQPENEKEFQELVSVVHIAHSISIAAGVGID
IAGLSTPISNKALQMIGTTDSDVQMYYTTLPEIQKHIRELIQA
>Mature_283_residues
MKEKIDQLFLNDAQLPRISSVVTKVMQMVQKQDVAIPDLAKEISHDPGLTADVIKLSNSAYYRAAKPIKTVQESLMTLGI
KTVKDIILLTAARGILKKDLKGYQIEAEDNWIHSLTVAELSKRICEQKKLKIGLDLAFTGGLLHNIGKVILADFFPAVIA
NLREELKIHSVSFEELERKHFGYSHEEVGEKLLEKWNFPKELIHVARNYSQPENEKEFQELVSVVHIAHSISIAAGVGID
IAGLSTPISNKALQMIGTTDSDVQMYYTTLPEIQKHIRELIQA

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 31747; Mature: 31747

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKIDQLFLNDAQLPRISSVVTKVMQMVQKQDVAIPDLAKEISHDPGLTADVIKLSNSA
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHCCCH
YYRAAKPIKTVQESLMTLGIKTVKDIILLTAARGILKKDLKGYQIEAEDNWIHSLTVAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
SKRICEQKKLKIGLDLAFTGGLLHNIGKVILADFFPAVIANLREELKIHSVSFEELERKH
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FGYSHEEVGEKLLEKWNFPKELIHVARNYSQPENEKEFQELVSVVHIAHSISIAAGVGID
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEE
IAGLSTPISNKALQMIGTTDSDVQMYYTTLPEIQKHIRELIQA
ECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEKIDQLFLNDAQLPRISSVVTKVMQMVQKQDVAIPDLAKEISHDPGLTADVIKLSNSA
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHCCCH
YYRAAKPIKTVQESLMTLGIKTVKDIILLTAARGILKKDLKGYQIEAEDNWIHSLTVAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
SKRICEQKKLKIGLDLAFTGGLLHNIGKVILADFFPAVIANLREELKIHSVSFEELERKH
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FGYSHEEVGEKLLEKWNFPKELIHVARNYSQPENEKEFQELVSVVHIAHSISIAAGVGID
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEE
IAGLSTPISNKALQMIGTTDSDVQMYYTTLPEIQKHIRELIQA
ECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]