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The map label for this gene is cheD2 [H]

Identifier: 116332541

GI number: 116332541

Start: 123728

End: 124234

Strand: Reverse

Name: cheD2 [H]

Synonym: LBJ_4107

Alternate gene names: 116332541

Gene position: 124234-123728 (Counterclockwise)

Preceding gene: 116332545

Following gene: 116332540

Centisome position: 41.44

GC content: 42.8

Gene sequence:

>507_bases
ATGCTGACAAAAGGATCAAAAGTAGTCAACGTAGGAATCGCCGATATGCAGGGAGCACAGTCTCCCGAAATTTTGAGAAC
CACTCTGGGTTCTTGTATCGGGGTGGTATTTTACGCTCCTGACAAAAAGATAGGAGCAATGGCTCACTTTATGCTTTCCA
AAGACCCAAGCGGAAAAGATTCACAAAAGAATCCTTTCAAATACGCAGAGACTGCAATTCCTCTCTTGATCAAAAAAATG
AGCGAAATGGGCTGCAACCACGGAGAATATTCGGTAAGACTCTTCGGAGGCGCCTCCATGTTCAAAGGAGTTCAATCCAG
TTTTTTACAAAACATCGGAGAACAGAACATTCTTATCGCCAGAACTATTTTGGAGCAAAGTAAAATTCCTTTAATCTTAG
AGGATGTCGGAGGGAACGACGGTAGAACTATCAGCTTGTATTTGGACGACGGCCGGGTTCTTTTAAAAAAAGGCGGGTTT
GAAAAGTATCTCTACAAGGTCAGGTAA

Upstream 100 bases:

>100_bases
CTTCTTCAAATTGTCTCAAAAAAGTATTGAAGAATTCGAGAGCCTCCTATAAAGTCTTGTTACACTTTTATAACTAAAAT
GACCGGGAAACGGGATACAA

Downstream 100 bases:

>100_bases
GAAAAGATGAAAGAAAAAATAGACCAACTTTTTTTAAACGACGCTCAACTTCCTAGAATTTCGTCCGTAGTTACGAAAGT
AATGCAAATGGTGCAAAAGC

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLTKGSKVVNVGIADMQGAQSPEILRTTLGSCIGVVFYAPDKKIGAMAHFMLSKDPSGKDSQKNPFKYAETAIPLLIKKM
SEMGCNHGEYSVRLFGGASMFKGVQSSFLQNIGEQNILIARTILEQSKIPLILEDVGGNDGRTISLYLDDGRVLLKKGGF
EKYLYKVR

Sequences:

>Translated_168_residues
MLTKGSKVVNVGIADMQGAQSPEILRTTLGSCIGVVFYAPDKKIGAMAHFMLSKDPSGKDSQKNPFKYAETAIPLLIKKM
SEMGCNHGEYSVRLFGGASMFKGVQSSFLQNIGEQNILIARTILEQSKIPLILEDVGGNDGRTISLYLDDGRVLLKKGGF
EKYLYKVR
>Mature_168_residues
MLTKGSKVVNVGIADMQGAQSPEILRTTLGSCIGVVFYAPDKKIGAMAHFMLSKDPSGKDSQKNPFKYAETAIPLLIKKM
SEMGCNHGEYSVRLFGGASMFKGVQSSFLQNIGEQNILIARTILEQSKIPLILEDVGGNDGRTISLYLDDGRVLLKKGGF
EKYLYKVR

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 18381; Mature: 18381

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKGSKVVNVGIADMQGAQSPEILRTTLGSCIGVVFYAPDKKIGAMAHFMLSKDPSGKD
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCCC
SQKNPFKYAETAIPLLIKKMSEMGCNHGEYSVRLFGGASMFKGVQSSFLQNIGEQNILIA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEH
RTILEQSKIPLILEDVGGNDGRTISLYLDDGRVLLKKGGFEKYLYKVR
HHHHHCCCCCEEEEECCCCCCCEEEEEECCCEEEEECCCHHHHHEECC
>Mature Secondary Structure
MLTKGSKVVNVGIADMQGAQSPEILRTTLGSCIGVVFYAPDKKIGAMAHFMLSKDPSGKD
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCCC
SQKNPFKYAETAIPLLIKKMSEMGCNHGEYSVRLFGGASMFKGVQSSFLQNIGEQNILIA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEH
RTILEQSKIPLILEDVGGNDGRTISLYLDDGRVLLKKGGFEKYLYKVR
HHHHHCCCCCEEEEECCCCCCCEEEEEECCCEEEEECCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA