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The map label for this gene is 116329110

Identifier: 116329110

GI number: 116329110

Start: 3000893

End: 3001393

Strand: Direct

Name: 116329110

Synonym: LBL_2532

Alternate gene names: NA

Gene position: 3000893-3001393 (Clockwise)

Preceding gene: 116329109

Following gene: 116329111

Centisome position: 83.02

GC content: 38.32

Gene sequence:

>501_bases
ATGGGAGAAGATTATACCGTAATGCAGAATATCCTTTGCAAAATGTCGAAGGAAATCATATTACAAACCTTGAAAGAGGA
TTCATTCCTACAAATCAAAAAACAAACTCCTTATTATCTGATATTCGCTTATTACGACGACGAGGAATCGGAGGTAATCT
TCGATAGCTCCGGTAAAATTAAGAATTCTCCCTATCCGGAGCTGACAAAAAAAGGAATAGATTTAAGTAAACTGTATGAT
TCGGAAGATAAAAGCATGGAAGTAGACGATCGAAAGCTCGAAGAAATTCCAGACGAGATCGGAGATATGGATTCCATGTA
CAGTCTTAGAATTTCCAAATCAAAAGTCCGTTCTTTGCCCGACACGATCGGAAAACTCAAAAATTGTAAGCAGCTCGATA
TCCAAAATAATCAAATCGAGTTTTTACCGGAAACGATCGGCGCTATGGAAAGTTTAGAGGAATTATCAGCGGGTAATAAC
AAATTGGACCTGCCTGCCTGA

Upstream 100 bases:

>100_bases
AAGGTTCTCATAAATTTTGGAGCATCGAAGTTTCCGGAAGTATATTTACCGTAACCTTCGGAAAAATCTAAAAGAAGAAC
CCGACGACATTTGGGAAACG

Downstream 100 bases:

>100_bases
AAGTATCTACCAACTCAAAAAACTGAAAGAAATCGGTTTGTGGGGAAATTCGTTTTCACAGGATCAAAAGACAAAGATCG
TTTCTCGTCTCAAAAAAAAC

Product: leucine-rich repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MGEDYTVMQNILCKMSKEIILQTLKEDSFLQIKKQTPYYLIFAYYDDEESEVIFDSSGKIKNSPYPELTKKGIDLSKLYD
SEDKSMEVDDRKLEEIPDEIGDMDSMYSLRISKSKVRSLPDTIGKLKNCKQLDIQNNQIEFLPETIGAMESLEELSAGNN
KLDLPA

Sequences:

>Translated_166_residues
MGEDYTVMQNILCKMSKEIILQTLKEDSFLQIKKQTPYYLIFAYYDDEESEVIFDSSGKIKNSPYPELTKKGIDLSKLYD
SEDKSMEVDDRKLEEIPDEIGDMDSMYSLRISKSKVRSLPDTIGKLKNCKQLDIQNNQIEFLPETIGAMESLEELSAGNN
KLDLPA
>Mature_165_residues
GEDYTVMQNILCKMSKEIILQTLKEDSFLQIKKQTPYYLIFAYYDDEESEVIFDSSGKIKNSPYPELTKKGIDLSKLYDS
EDKSMEVDDRKLEEIPDEIGDMDSMYSLRISKSKVRSLPDTIGKLKNCKQLDIQNNQIEFLPETIGAMESLEELSAGNNK
LDLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71998904, Length=120, Percent_Identity=32.5, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71998900, Length=120, Percent_Identity=32.5, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19039; Mature: 18908

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEDYTVMQNILCKMSKEIILQTLKEDSFLQIKKQTPYYLIFAYYDDEESEVIFDSSGKI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEECCCCCC
KNSPYPELTKKGIDLSKLYDSEDKSMEVDDRKLEEIPDEIGDMDSMYSLRISKSKVRSLP
CCCCCHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DTIGKLKNCKQLDIQNNQIEFLPETIGAMESLEELSAGNNKLDLPA
HHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GEDYTVMQNILCKMSKEIILQTLKEDSFLQIKKQTPYYLIFAYYDDEESEVIFDSSGKI
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEECCCCCC
KNSPYPELTKKGIDLSKLYDSEDKSMEVDDRKLEEIPDEIGDMDSMYSLRISKSKVRSLP
CCCCCHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DTIGKLKNCKQLDIQNNQIEFLPETIGAMESLEELSAGNNKLDLPA
HHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA