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The map label for this gene is msrB [H]

Identifier: 116329111

GI number: 116329111

Start: 3001793

End: 3002293

Strand: Direct

Name: msrB [H]

Synonym: LBL_2533

Alternate gene names: 116329111

Gene position: 3001793-3002293 (Clockwise)

Preceding gene: 116329110

Following gene: 116329112

Centisome position: 83.05

GC content: 42.32

Gene sequence:

>501_bases
ATGAAAAACATGTTTTTATTTCCAGTCATCTTAGTATCCTTAGTATTTTCAGGTTGCTGCAAAGTCGGCGGCGACTCAAA
CCGGACAAACCAAAAAGGAGAGAGTATGAGTTACGAAATTAACAAATCCGAAGACGAATGGCAAAAAGAACTCACTCCGG
AACAATATAAAATTTTAAGACAAAAGGGAACCGAAATGGCGTTTACCGGAGCCCTTTATAAAAATCAAGACAAAGGAACC
TACGTTTGTGCAGCTTGTGGCGCCGTTTTATTTTCTTCCGAAACCAAGTACGAATCCGGGTCCGGTTGGCCTTCTTTCTA
TCAACCCACAAAGAAAGGCGCTGTAAACGAAGAAAGAGACAACACTCATGGAATGGTGAGAACCGAAATTCTCTGCGCCA
AATGTGGAGGACATTTGGGTCACGTATTCAACGATGGGCCGAGTCCTACCGGGCTACGATATTGTATCAATTCCGCTTCT
TTAAAATTTCGGAAAGAATAG

Upstream 100 bases:

>100_bases
CATACTAAAACAACACACGATCGTATTTTTAAAAAAACACGCTTTGTTTTTAATCCGTTTTTTTCAGTAACCTATTCCGA
CCGAAAACGAATTTTTACGT

Downstream 100 bases:

>100_bases
AGTTTGAAAATGAATTCTTTATCTGCTTCTATTTTCCGGAAACGGTCAATTGAAGCAGTTTTGTGAATCCCTCACTATGG
AATAATTTCGAAAAATACTT

Product: methionine sulfoxide reductase B

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKNMFLFPVILVSLVFSGCCKVGGDSNRTNQKGESMSYEINKSEDEWQKELTPEQYKILRQKGTEMAFTGALYKNQDKGT
YVCAACGAVLFSSETKYESGSGWPSFYQPTKKGAVNEERDNTHGMVRTEILCAKCGGHLGHVFNDGPSPTGLRYCINSAS
LKFRKE

Sequences:

>Translated_166_residues
MKNMFLFPVILVSLVFSGCCKVGGDSNRTNQKGESMSYEINKSEDEWQKELTPEQYKILRQKGTEMAFTGALYKNQDKGT
YVCAACGAVLFSSETKYESGSGWPSFYQPTKKGAVNEERDNTHGMVRTEILCAKCGGHLGHVFNDGPSPTGLRYCINSAS
LKFRKE
>Mature_166_residues
MKNMFLFPVILVSLVFSGCCKVGGDSNRTNQKGESMSYEINKSEDEWQKELTPEQYKILRQKGTEMAFTGALYKNQDKGT
YVCAACGAVLFSSETKYESGSGWPSFYQPTKKGAVNEERDNTHGMVRTEILCAKCGGHLGHVFNDGPSPTGLRYCINSAS
LKFRKE

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=121, Percent_Identity=52.8925619834711, Blast_Score=142, Evalue=1e-34,
Organism=Homo sapiens, GI301336162, Length=121, Percent_Identity=52.8925619834711, Blast_Score=142, Evalue=1e-34,
Organism=Homo sapiens, GI73089054, Length=121, Percent_Identity=52.8925619834711, Blast_Score=142, Evalue=1e-34,
Organism=Homo sapiens, GI37620216, Length=121, Percent_Identity=52.8925619834711, Blast_Score=142, Evalue=1e-34,
Organism=Homo sapiens, GI117606353, Length=141, Percent_Identity=45.3900709219858, Blast_Score=135, Evalue=2e-32,
Organism=Homo sapiens, GI7706511, Length=101, Percent_Identity=43.5643564356436, Blast_Score=74, Evalue=5e-14,
Organism=Escherichia coli, GI1788077, Length=121, Percent_Identity=52.0661157024793, Blast_Score=138, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI115532676, Length=123, Percent_Identity=46.3414634146341, Blast_Score=118, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17553450, Length=123, Percent_Identity=46.3414634146341, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6319816, Length=143, Percent_Identity=42.6573426573427, Blast_Score=116, Evalue=2e-27,
Organism=Drosophila melanogaster, GI221378664, Length=133, Percent_Identity=48.8721804511278, Blast_Score=139, Evalue=1e-33,
Organism=Drosophila melanogaster, GI221378662, Length=140, Percent_Identity=47.1428571428571, Blast_Score=138, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24645799, Length=131, Percent_Identity=48.8549618320611, Blast_Score=137, Evalue=5e-33,
Organism=Drosophila melanogaster, GI45553335, Length=131, Percent_Identity=48.8549618320611, Blast_Score=136, Evalue=7e-33,
Organism=Drosophila melanogaster, GI21356369, Length=131, Percent_Identity=48.8549618320611, Blast_Score=136, Evalue=7e-33,
Organism=Drosophila melanogaster, GI24645801, Length=142, Percent_Identity=45.0704225352113, Blast_Score=132, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24645804, Length=142, Percent_Identity=45.0704225352113, Blast_Score=131, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 18463; Mature: 18463

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMFLFPVILVSLVFSGCCKVGGDSNRTNQKGESMSYEINKSEDEWQKELTPEQYKILR
CCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHHHHHHHH
QKGTEMAFTGALYKNQDKGTYVCAACGAVLFSSETKYESGSGWPSFYQPTKKGAVNEERD
HCCCCEEEECHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTHGMVRTEILCAKCGGHLGHVFNDGPSPTGLRYCINSASLKFRKE
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC
>Mature Secondary Structure
MKNMFLFPVILVSLVFSGCCKVGGDSNRTNQKGESMSYEINKSEDEWQKELTPEQYKILR
CCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHHHHHHHH
QKGTEMAFTGALYKNQDKGTYVCAACGAVLFSSETKYESGSGWPSFYQPTKKGAVNEERD
HCCCCEEEECHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTHGMVRTEILCAKCGGHLGHVFNDGPSPTGLRYCINSASLKFRKE
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA