Click here to switch to the map view.

The map label for this gene is 116329109

Identifier: 116329109

GI number: 116329109

Start: 2999881

End: 3000495

Strand: Direct

Name: 116329109

Synonym: LBL_2531

Alternate gene names: NA

Gene position: 2999881-3000495 (Clockwise)

Preceding gene: 116329105

Following gene: 116329110

Centisome position: 83.0

GC content: 40.65

Gene sequence:

>615_bases
ATGAAAACTCGACCTAACAAAAAGAAAGAATCAGGAACCGGTGTTCGAGAAAGAATTTTAGATACGGTCACCTCTCTCTT
CTACAAACAGGGTTTTTCCAACACCGGAATGAGGCAAATCATTCAGGAATCCAATTCCGTAGCGGCGAGTTTATACGATC
ATTATCCTTCCAAAAAAGAATTGGGACTTGCTTATCTATCACGTCAGGAAGAAAAAACTCTCAGTGATTTACAAGACTTG
ATGGATCGTTATCCTGATCTCGGTGAATTTTTAAGAGCCTGGGTGATTCTCAAAGAAAAACAAATCCGCCACGGAGAATT
CGTGGGATGTCCTTTTGCAGGTTTTGCAAGTCAAGTAATGGATTCCGATCCGGAATATACGGAATTCCTTAAGGACATCG
TGACTAAATGGACTCGGATAATTAGTGATTATCTTCAAAAAGCGATCGGTTCCGGTCAGCTTAAAAGAAACATGGATATT
CAATACGTCGCTAGAAGAATTTTGATGGCCTATCACGGTTCGGTTACAATGTGGAGAATGACCAAGGAACTTCGTTTCAT
CCGTGAAATGGACCATTCCCTCCGTGAAATCGTGGAAGAATACAGAATTTTTTGA

Upstream 100 bases:

>100_bases
AACAAAAAACAGAACGAACGTTCTGTTTTTTGTTCTTATCTTCCAAATTCATTGACAGAAGATCTTTCCGATTGAAGACT
GAATCTTATAGAATTACCGT

Downstream 100 bases:

>100_bases
CGTGAATCATCTCATAACGTAGAATCCGATTTTCAATCCGAGACCAAAAGCCCAAATTTTTTTATATTGAATTCATATTA
GAGTTATTGAAAAATTCCAT

Product: AcrR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Repressor

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKTRPNKKKESGTGVRERILDTVTSLFYKQGFSNTGMRQIIQESNSVAASLYDHYPSKKELGLAYLSRQEEKTLSDLQDL
MDRYPDLGEFLRAWVILKEKQIRHGEFVGCPFAGFASQVMDSDPEYTEFLKDIVTKWTRIISDYLQKAIGSGQLKRNMDI
QYVARRILMAYHGSVTMWRMTKELRFIREMDHSLREIVEEYRIF

Sequences:

>Translated_204_residues
MKTRPNKKKESGTGVRERILDTVTSLFYKQGFSNTGMRQIIQESNSVAASLYDHYPSKKELGLAYLSRQEEKTLSDLQDL
MDRYPDLGEFLRAWVILKEKQIRHGEFVGCPFAGFASQVMDSDPEYTEFLKDIVTKWTRIISDYLQKAIGSGQLKRNMDI
QYVARRILMAYHGSVTMWRMTKELRFIREMDHSLREIVEEYRIF
>Mature_204_residues
MKTRPNKKKESGTGVRERILDTVTSLFYKQGFSNTGMRQIIQESNSVAASLYDHYPSKKELGLAYLSRQEEKTLSDLQDL
MDRYPDLGEFLRAWVILKEKQIRHGEFVGCPFAGFASQVMDSDPEYTEFLKDIVTKWTRIISDYLQKAIGSGQLKRNMDI
QYVARRILMAYHGSVTMWRMTKELRFIREMDHSLREIVEEYRIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23969; Mature: 23969

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRPNKKKESGTGVRERILDTVTSLFYKQGFSNTGMRQIIQESNSVAASLYDHYPSKKE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
LGLAYLSRQEEKTLSDLQDLMDRYPDLGEFLRAWVILKEKQIRHGEFVGCPFAGFASQVM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
DSDPEYTEFLKDIVTKWTRIISDYLQKAIGSGQLKRNMDIQYVARRILMAYHGSVTMWRM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHH
TKELRFIREMDHSLREIVEEYRIF
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTRPNKKKESGTGVRERILDTVTSLFYKQGFSNTGMRQIIQESNSVAASLYDHYPSKKE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
LGLAYLSRQEEKTLSDLQDLMDRYPDLGEFLRAWVILKEKQIRHGEFVGCPFAGFASQVM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
DSDPEYTEFLKDIVTKWTRIISDYLQKAIGSGQLKRNMDIQYVARRILMAYHGSVTMWRM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHH
TKELRFIREMDHSLREIVEEYRIF
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA