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The map label for this gene is flhB [H]

Identifier: 116328495

GI number: 116328495

Start: 2147390

End: 2148922

Strand: Reverse

Name: flhB [H]

Synonym: LBL_1843

Alternate gene names: 116328495

Gene position: 2148922-2147390 (Counterclockwise)

Preceding gene: 116328496

Following gene: 116328494

Centisome position: 59.45

GC content: 46.58

Gene sequence:

>1533_bases
ATGAAAGGGACGCGTTGGTTGAAAAAATGGCTCAGGGAGGAAAGTTCCTCTTATGACGCGCCCCTTAGAAAGCGTCATGC
TGCATTTTTTAAAGCTGAACAACGTGTCTTTTGCTACTTCCTCCCCGAGAAATCAAATCGTGTTCTCCCGGGATCTAACG
TTTCTGAAAAATGTAGTACCTCCGACGTCCTCCGTGATACGAGCGGCGCCCCTCCCGTGTTGGGAGGAGGTGAGCTGGCG
GGGAGAATTGAGAAATTTTTCTCTATCACGAAAATTCTCGGATTGCAAAAAGAATTTTTAAATCCTGTCGGAACTCTGAA
AATTTTCGAAAGGCTCGAGAAGTTTTTCTTCCGCCGGTTTGGGCAAGACAAAGAGGCTGTTCGGATCCCGCTTTCCCTGC
TTTGTTCAACAAACACGTGTTATACGATGTCGGCGCTCGCGACCGATTTCAAAATCGACTTACAACTCTTCGCCGCTGAA
GATGAAGGCCGAACCGAACCCGGATCCGAACGAAGAAGAAGAGAAGAACGCGAAAAAGGAAACGTTCCCAAATCTCCCGA
ACTCCCCGCAGCAGTGGTGCTTCTCGCGGGAGTCATCCTCATATATCTCATGGGAGAATATTTCTTCATGAGAACGTTTT
ACATTCTCCGTAAATATATTCACGGAGTAGGACAGAGAACCGATATTAGTTCCGAGTCCGTGACCGAACTTTTAAAAAAC
GCCTCCACGGATTTGTTCACACTCCTATGGCCTTTGCTCGGAATTACATTTGTCGGCGCTGTGATCGGAAATGTCGCACA
AGTGGGATTTATTTTCACGCCCCGCGCTTTGAGTTTTAATTTCAGTAGGATCAGGCCCAACTTTAAGAAAGTCCTTCCGA
CACGTCAGACGCTCTTTAACTTGGGAAAATCTCTCGCAAAGGTAGGATTGATCGCGTGGGTTTCTTACATAATCATTAGT
AAGGATTTTTTTTCGATCCTTATTTCCGGAGAGATGGGACTTGAACAGGCAGTCGCTCTTGTGATGAGTAGTTCTTTTAA
GATCTTTTTGGTCGTAGGGATTATTCTTCTCGCGATCAGCATCGTGGACTATTTATATCAAAGATACGAATACGAAGAGT
CTTTAAAGATGACTCCTTCCGAAGCGAAGAGAGAAGCCAAAGAATCCGACGGGGACCGCTCTCTTCAAGCAAGAAGAAGA
CAACTCGCCCGCGATATGATGAATAAGCGAAAAATGCTCGCGAAGGTCCCGGAAGCGGACGTTGTCATCACAAACCCGAC
TCACTTTGCAGTGGCTCTGGAATACAAACCCGGAATTCACAAGGCGCCGATCGTAATTGCAAAGGGTGTGGACGATTTTG
CGCTTCTTATCATTCGAATCGCAAGAGAAAATGGAGTTCCCACGGTGGAAGATCGTATTCAAGCACGAGGACTTTATGAG
GAAGTGGAACTTGGGGCGGAAGTTCCACAGCAATTCTATCGTGCGATCGCAACCATTCTCTCTCGTTTGGAATCTTTTCG
GAGAGCCGTATAA

Upstream 100 bases:

>100_bases
TCGTGATGATCTTTATTACCCCTTATTTGATTTCACAGATGGGGGCGGCTTTTGATTTGTCCTTTGATAAAGTCGATCTG
ATGCTTCAAGGATGGCCGAA

Downstream 100 bases:

>100_bases
GAGGAAATTATGGAAAAGAAATGGTGGAATCAATCCGACGTGATTTTAGGAGTCGGAGCCGTTGCGATCGTCGCGATGCT
CGTAATTCCGCTTCCCGGGC

Product: endoflagellar biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MKGTRWLKKWLREESSSYDAPLRKRHAAFFKAEQRVFCYFLPEKSNRVLPGSNVSEKCSTSDVLRDTSGAPPVLGGGELA
GRIEKFFSITKILGLQKEFLNPVGTLKIFERLEKFFFRRFGQDKEAVRIPLSLLCSTNTCYTMSALATDFKIDLQLFAAE
DEGRTEPGSERRRREEREKGNVPKSPELPAAVVLLAGVILIYLMGEYFFMRTFYILRKYIHGVGQRTDISSESVTELLKN
ASTDLFTLLWPLLGITFVGAVIGNVAQVGFIFTPRALSFNFSRIRPNFKKVLPTRQTLFNLGKSLAKVGLIAWVSYIIIS
KDFFSILISGEMGLEQAVALVMSSSFKIFLVVGIILLAISIVDYLYQRYEYEESLKMTPSEAKREAKESDGDRSLQARRR
QLARDMMNKRKMLAKVPEADVVITNPTHFAVALEYKPGIHKAPIVIAKGVDDFALLIIRIARENGVPTVEDRIQARGLYE
EVELGAEVPQQFYRAIATILSRLESFRRAV

Sequences:

>Translated_510_residues
MKGTRWLKKWLREESSSYDAPLRKRHAAFFKAEQRVFCYFLPEKSNRVLPGSNVSEKCSTSDVLRDTSGAPPVLGGGELA
GRIEKFFSITKILGLQKEFLNPVGTLKIFERLEKFFFRRFGQDKEAVRIPLSLLCSTNTCYTMSALATDFKIDLQLFAAE
DEGRTEPGSERRRREEREKGNVPKSPELPAAVVLLAGVILIYLMGEYFFMRTFYILRKYIHGVGQRTDISSESVTELLKN
ASTDLFTLLWPLLGITFVGAVIGNVAQVGFIFTPRALSFNFSRIRPNFKKVLPTRQTLFNLGKSLAKVGLIAWVSYIIIS
KDFFSILISGEMGLEQAVALVMSSSFKIFLVVGIILLAISIVDYLYQRYEYEESLKMTPSEAKREAKESDGDRSLQARRR
QLARDMMNKRKMLAKVPEADVVITNPTHFAVALEYKPGIHKAPIVIAKGVDDFALLIIRIARENGVPTVEDRIQARGLYE
EVELGAEVPQQFYRAIATILSRLESFRRAV
>Mature_510_residues
MKGTRWLKKWLREESSSYDAPLRKRHAAFFKAEQRVFCYFLPEKSNRVLPGSNVSEKCSTSDVLRDTSGAPPVLGGGELA
GRIEKFFSITKILGLQKEFLNPVGTLKIFERLEKFFFRRFGQDKEAVRIPLSLLCSTNTCYTMSALATDFKIDLQLFAAE
DEGRTEPGSERRRREEREKGNVPKSPELPAAVVLLAGVILIYLMGEYFFMRTFYILRKYIHGVGQRTDISSESVTELLKN
ASTDLFTLLWPLLGITFVGAVIGNVAQVGFIFTPRALSFNFSRIRPNFKKVLPTRQTLFNLGKSLAKVGLIAWVSYIIIS
KDFFSILISGEMGLEQAVALVMSSSFKIFLVVGIILLAISIVDYLYQRYEYEESLKMTPSEAKREAKESDGDRSLQARRR
QLARDMMNKRKMLAKVPEADVVITNPTHFAVALEYKPGIHKAPIVIAKGVDDFALLIIRIARENGVPTVEDRIQARGLYE
EVELGAEVPQQFYRAIATILSRLESFRRAV

Specific function: May be involved in the export of flagellum proteins [H]

COG id: COG1377

COG function: function code NU; Flagellar biosynthesis pathway, component FlhB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

Organism=Escherichia coli, GI1788188, Length=353, Percent_Identity=29.4617563739377, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006136
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 57705; Mature: 57705

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTRWLKKWLREESSSYDAPLRKRHAAFFKAEQRVFCYFLPEKSNRVLPGSNVSEKCST
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHCCH
SDVLRDTSGAPPVLGGGELAGRIEKFFSITKILGLQKEFLNPVGTLKIFERLEKFFFRRF
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GQDKEAVRIPLSLLCSTNTCYTMSALATDFKIDLQLFAAEDEGRTEPGSERRRREEREKG
CCCCHHHHCCHHHHCCCCCCEEHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHC
NVPKSPELPAAVVLLAGVILIYLMGEYFFMRTFYILRKYIHGVGQRTDISSESVTELLKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
ASTDLFTLLWPLLGITFVGAVIGNVAQVGFIFTPRALSFNFSRIRPNFKKVLPTRQTLFN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHCCCHHHHCCHHHHHCCHHHHHHH
LGKSLAKVGLIAWVSYIIISKDFFSILISGEMGLEQAVALVMSSSFKIFLVVGIILLAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
IVDYLYQRYEYEESLKMTPSEAKREAKESDGDRSLQARRRQLARDMMNKRKMLAKVPEAD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VVITNPTHFAVALEYKPGIHKAPIVIAKGVDDFALLIIRIARENGVPTVEDRIQARGLYE
EEEECCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHH
EVELGAEVPQQFYRAIATILSRLESFRRAV
HHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGTRWLKKWLREESSSYDAPLRKRHAAFFKAEQRVFCYFLPEKSNRVLPGSNVSEKCST
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHCCH
SDVLRDTSGAPPVLGGGELAGRIEKFFSITKILGLQKEFLNPVGTLKIFERLEKFFFRRF
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GQDKEAVRIPLSLLCSTNTCYTMSALATDFKIDLQLFAAEDEGRTEPGSERRRREEREKG
CCCCHHHHCCHHHHCCCCCCEEHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHC
NVPKSPELPAAVVLLAGVILIYLMGEYFFMRTFYILRKYIHGVGQRTDISSESVTELLKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
ASTDLFTLLWPLLGITFVGAVIGNVAQVGFIFTPRALSFNFSRIRPNFKKVLPTRQTLFN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHCCCHHHHCCHHHHHCCHHHHHHH
LGKSLAKVGLIAWVSYIIISKDFFSILISGEMGLEQAVALVMSSSFKIFLVVGIILLAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
IVDYLYQRYEYEESLKMTPSEAKREAKESDGDRSLQARRRQLARDMMNKRKMLAKVPEAD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VVITNPTHFAVALEYKPGIHKAPIVIAKGVDDFALLIIRIARENGVPTVEDRIQARGLYE
EEEECCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHH
EVELGAEVPQQFYRAIATILSRLESFRRAV
HHHHCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]