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The map label for this gene is flhA [H]

Identifier: 116328494

GI number: 116328494

Start: 2145263

End: 2147380

Strand: Reverse

Name: flhA [H]

Synonym: LBL_1842

Alternate gene names: 116328494

Gene position: 2147380-2145263 (Counterclockwise)

Preceding gene: 116328495

Following gene: 116328493

Centisome position: 59.41

GC content: 44.52

Gene sequence:

>2118_bases
ATGGAAAAGAAATGGTGGAATCAATCCGACGTGATTTTAGGAGTCGGAGCCGTTGCGATCGTCGCGATGCTCGTAATTCC
GCTTCCCGGGCTTATATTAGATATTTTGATTATCGTTAGTTTGGCGATCGGGCTTTTGGTTCTTCTTACTTCGCTTTCGG
TCAACGAGCCCGCGGATTTTTCGATCTTTCCGAGTTTACTTCTGATTACTACGTTGTATCGACTTGCGCTCAATGTATCG
ACTACGAGACAAATTCTTTCCAAAGGTCCTGCGATGAACAGTCACGTCATTGACGCTTTCGGATCTTTTATCATAGGAAG
CGAGTCCGGACTTTCTAAATATGTGGTGGGATTTATCATATTTATCATTCTCGTTCTTGTTCAGATTCTGGTGATCACAA
AAGGTGCTACTCGGATTTCGGAAGTTGCAGCCCGTTTTACTTTGGACGCCTTGCCCGGAAAACAGATGGCGATCGATATG
GAACTTTCTTCCGGAAATATCAACGAGGAGGAAGCCAAAAAAAGGAGAAAGAGGATAGAAGCCGAAGTGGACTTTTACGG
TTCCATGGATGGAGCGAGTAAATTCGTTCAGGGAGACGTACGAGCCGGGCTTATCATCACCGCCATTAATTTGTTAGGCG
GAGTGATCATCGGTTCTTCGATTCGAGGAGAATCTTTCACCCAGGCCATCGAAACCTACGGAAAGTTCACTATAGGGGAC
GGACTCGTGTCTCAGATTCCCGCACTGTTGACAACGGTGGCAACCGGCATTATCGTCACTCGTTCCGGTTCCGAATCGGA
TCTTGCTACTCAGTTCAAAAGCCAACTCTTCAGCAATTCCAAGGTTCTTTATGTGGTTGCGGGAAGTTTGGGATTTTCCG
CATTTATTCCGGGACTACCGTTTATTCCTTTAGTTATTCTTTCGGCGGGAATTGCTTACTTGGGGTATTCGCTTGAACAA
ACCGTTAAAGAGCAACTTGAATCGATCGAGAAAAAAGAGAAAGAATCAGGTCAGGATCGTAAACCGAAGGATTTTTACGA
AGAACTCAGGACCGATCCGATCGAAATCGAAGTCGGTTATCATTTAATTCCGTTAGTCGATACTTCTCAAGGTGGAGCGT
TGCTGGATCAAATCAGCAATCTCAGAAAAAAGTTTGCCCAAGACAACGGAGTTGTAATTCCTCCCGTAAGAATTTTAGAC
AACTTGGATTTAAATCCGGATACGTATTCGATTAAGATTAACGGAACTGAGGTGGGAATTTCCACGGTAAAGCCGGACAA
GTTGATGGCTCTCAATACAAGTCCGGGAACGGCGGAATCGATTCAAGGAGAGGATTTTCTCGAACCTTCTTTCGGTCAAA
AGGCGAAGTGGATTTCCTCCGAAGATAAGTCGGAGGCTGAAGCGAAAGGTTACACCGTGGTCGACGCGTCTACCGTGGTT
GTTACACATTTAAAAGAACTTTTGGCTACACACGCATCTACCTTGCTCGGAAGAGAAGAAGTCAAAAAACTTCTGGATCA
TTACAAAACGAGTTATCCGACGCTCATCGGAGAATTGGACGCGGACAAACCGGGTAACTTGGGAATCATCCAACAAGTGT
TACAGAATCTTCTCAGGGAAGGTCTTGGAATCAGAAACCTCGTGCCTATACTTGAATCGATTGCGAACAATTTATCTAAG
TATCAAAATCCGTATATACTCACGGAATTGGTACGACAGTCCGTTGCAAGAACCGTGGTGAAGGATTATCTTTCCATAGA
CGGTAAACTGCGCGTGATTACACTTGAAAGTAGAATTCTTGATCGGCTCAATAAATCGATCACTCAGGACAGAATCGAAA
ACAGGGACGTTCTTTCTCTGGCTCCCGATTTTTACAAAAAATTAATCGATAGTGTCGCCGAACTCTATCGAAATTTTCGA
ATGGAAGGAAAGTTTCCGATTTTTGTGGTGAACCGGGACGTACGTTTACCGTTTTCATATCTGCTCGCAAAGGAGTTTCC
GCCTCGCAATTTTGGAGTCCTTGCTTATGAAGAAATACATTCTTCCGTGGATTCGGTGATAGAAGCCGAACTCAAACTTC
CTCAAACACAAACCGTGGGAGTAGAGGAAGAAGCATGA

Upstream 100 bases:

>100_bases
AGTGGAACTTGGGGCGGAAGTTCCACAGCAATTCTATCGTGCGATCGCAACCATTCTCTCTCGTTTGGAATCTTTTCGGA
GAGCCGTATAAGAGGAAATT

Downstream 100 bases:

>100_bases
AATTATTGGAATATTCGATCTTTCTAAAGGGAAAGGATCAGGGAGTTGAAAATGGAATTCGCTAAAATCCGTGGTAAAAG
TTACCAAGACTGTTTGATGG

Product: endoflagellar biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 705; Mature: 705

Protein sequence:

>705_residues
MEKKWWNQSDVILGVGAVAIVAMLVIPLPGLILDILIIVSLAIGLLVLLTSLSVNEPADFSIFPSLLLITTLYRLALNVS
TTRQILSKGPAMNSHVIDAFGSFIIGSESGLSKYVVGFIIFIILVLVQILVITKGATRISEVAARFTLDALPGKQMAIDM
ELSSGNINEEEAKKRRKRIEAEVDFYGSMDGASKFVQGDVRAGLIITAINLLGGVIIGSSIRGESFTQAIETYGKFTIGD
GLVSQIPALLTTVATGIIVTRSGSESDLATQFKSQLFSNSKVLYVVAGSLGFSAFIPGLPFIPLVILSAGIAYLGYSLEQ
TVKEQLESIEKKEKESGQDRKPKDFYEELRTDPIEIEVGYHLIPLVDTSQGGALLDQISNLRKKFAQDNGVVIPPVRILD
NLDLNPDTYSIKINGTEVGISTVKPDKLMALNTSPGTAESIQGEDFLEPSFGQKAKWISSEDKSEAEAKGYTVVDASTVV
VTHLKELLATHASTLLGREEVKKLLDHYKTSYPTLIGELDADKPGNLGIIQQVLQNLLREGLGIRNLVPILESIANNLSK
YQNPYILTELVRQSVARTVVKDYLSIDGKLRVITLESRILDRLNKSITQDRIENRDVLSLAPDFYKKLIDSVAELYRNFR
MEGKFPIFVVNRDVRLPFSYLLAKEFPPRNFGVLAYEEIHSSVDSVIEAELKLPQTQTVGVEEEA

Sequences:

>Translated_705_residues
MEKKWWNQSDVILGVGAVAIVAMLVIPLPGLILDILIIVSLAIGLLVLLTSLSVNEPADFSIFPSLLLITTLYRLALNVS
TTRQILSKGPAMNSHVIDAFGSFIIGSESGLSKYVVGFIIFIILVLVQILVITKGATRISEVAARFTLDALPGKQMAIDM
ELSSGNINEEEAKKRRKRIEAEVDFYGSMDGASKFVQGDVRAGLIITAINLLGGVIIGSSIRGESFTQAIETYGKFTIGD
GLVSQIPALLTTVATGIIVTRSGSESDLATQFKSQLFSNSKVLYVVAGSLGFSAFIPGLPFIPLVILSAGIAYLGYSLEQ
TVKEQLESIEKKEKESGQDRKPKDFYEELRTDPIEIEVGYHLIPLVDTSQGGALLDQISNLRKKFAQDNGVVIPPVRILD
NLDLNPDTYSIKINGTEVGISTVKPDKLMALNTSPGTAESIQGEDFLEPSFGQKAKWISSEDKSEAEAKGYTVVDASTVV
VTHLKELLATHASTLLGREEVKKLLDHYKTSYPTLIGELDADKPGNLGIIQQVLQNLLREGLGIRNLVPILESIANNLSK
YQNPYILTELVRQSVARTVVKDYLSIDGKLRVITLESRILDRLNKSITQDRIENRDVLSLAPDFYKKLIDSVAELYRNFR
MEGKFPIFVVNRDVRLPFSYLLAKEFPPRNFGVLAYEEIHSSVDSVIEAELKLPQTQTVGVEEEA
>Mature_705_residues
MEKKWWNQSDVILGVGAVAIVAMLVIPLPGLILDILIIVSLAIGLLVLLTSLSVNEPADFSIFPSLLLITTLYRLALNVS
TTRQILSKGPAMNSHVIDAFGSFIIGSESGLSKYVVGFIIFIILVLVQILVITKGATRISEVAARFTLDALPGKQMAIDM
ELSSGNINEEEAKKRRKRIEAEVDFYGSMDGASKFVQGDVRAGLIITAINLLGGVIIGSSIRGESFTQAIETYGKFTIGD
GLVSQIPALLTTVATGIIVTRSGSESDLATQFKSQLFSNSKVLYVVAGSLGFSAFIPGLPFIPLVILSAGIAYLGYSLEQ
TVKEQLESIEKKEKESGQDRKPKDFYEELRTDPIEIEVGYHLIPLVDTSQGGALLDQISNLRKKFAQDNGVVIPPVRILD
NLDLNPDTYSIKINGTEVGISTVKPDKLMALNTSPGTAESIQGEDFLEPSFGQKAKWISSEDKSEAEAKGYTVVDASTVV
VTHLKELLATHASTLLGREEVKKLLDHYKTSYPTLIGELDADKPGNLGIIQQVLQNLLREGLGIRNLVPILESIANNLSK
YQNPYILTELVRQSVARTVVKDYLSIDGKLRVITLESRILDRLNKSITQDRIENRDVLSLAPDFYKKLIDSVAELYRNFR
MEGKFPIFVVNRDVRLPFSYLLAKEFPPRNFGVLAYEEIHSSVDSVIEAELKLPQTQTVGVEEEA

Specific function: Required for formation of the rod structure of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]

COG id: COG1298

COG function: function code NU; Flagellar biosynthesis pathway, component FlhA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=657, Percent_Identity=40.7914764079148, Blast_Score=457, Evalue=1e-129,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006301
- InterPro:   IPR001712 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 77319; Mature: 77319

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKWWNQSDVILGVGAVAIVAMLVIPLPGLILDILIIVSLAIGLLVLLTSLSVNEPADF
CCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SIFPSLLLITTLYRLALNVSTTRQILSKGPAMNSHVIDAFGSFIIGSESGLSKYVVGFII
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHH
FIILVLVQILVITKGATRISEVAARFTLDALPGKQMAIDMELSSGNINEEEAKKRRKRIE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCC
AEVDFYGSMDGASKFVQGDVRAGLIITAINLLGGVIIGSSIRGESFTQAIETYGKFTIGD
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEECC
GLVSQIPALLTTVATGIIVTRSGSESDLATQFKSQLFSNSKVLYVVAGSLGFSAFIPGLP
HHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCC
FIPLVILSAGIAYLGYSLEQTVKEQLESIEKKEKESGQDRKPKDFYEELRTDPIEIEVGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECC
HLIPLVDTSQGGALLDQISNLRKKFAQDNGVVIPPVRILDNLDLNPDTYSIKINGTEVGI
EEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCEEEEEECCEEECC
STVKPDKLMALNTSPGTAESIQGEDFLEPSFGQKAKWISSEDKSEAEAKGYTVVDASTVV
EECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEHHHHH
VTHLKELLATHASTLLGREEVKKLLDHYKTSYPTLIGELDADKPGNLGIIQQVLQNLLRE
HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHH
GLGIRNLVPILESIANNLSKYQNPYILTELVRQSVARTVVKDYLSIDGKLRVITLESRIL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH
DRLNKSITQDRIENRDVLSLAPDFYKKLIDSVAELYRNFRMEGKFPIFVVNRDVRLPFSY
HHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHH
LLAKEFPPRNFGVLAYEEIHSSVDSVIEAELKLPQTQTVGVEEEA
HHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKKWWNQSDVILGVGAVAIVAMLVIPLPGLILDILIIVSLAIGLLVLLTSLSVNEPADF
CCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SIFPSLLLITTLYRLALNVSTTRQILSKGPAMNSHVIDAFGSFIIGSESGLSKYVVGFII
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHH
FIILVLVQILVITKGATRISEVAARFTLDALPGKQMAIDMELSSGNINEEEAKKRRKRIE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCC
AEVDFYGSMDGASKFVQGDVRAGLIITAINLLGGVIIGSSIRGESFTQAIETYGKFTIGD
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEECC
GLVSQIPALLTTVATGIIVTRSGSESDLATQFKSQLFSNSKVLYVVAGSLGFSAFIPGLP
HHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCC
FIPLVILSAGIAYLGYSLEQTVKEQLESIEKKEKESGQDRKPKDFYEELRTDPIEIEVGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECC
HLIPLVDTSQGGALLDQISNLRKKFAQDNGVVIPPVRILDNLDLNPDTYSIKINGTEVGI
EEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCEEEEEECCEEECC
STVKPDKLMALNTSPGTAESIQGEDFLEPSFGQKAKWISSEDKSEAEAKGYTVVDASTVV
EECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEHHHHH
VTHLKELLATHASTLLGREEVKKLLDHYKTSYPTLIGELDADKPGNLGIIQQVLQNLLRE
HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHH
GLGIRNLVPILESIANNLSKYQNPYILTELVRQSVARTVVKDYLSIDGKLRVITLESRIL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH
DRLNKSITQDRIENRDVLSLAPDFYKKLIDSVAELYRNFRMEGKFPIFVVNRDVRLPFSY
HHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHH
LLAKEFPPRNFGVLAYEEIHSSVDSVIEAELKLPQTQTVGVEEEA
HHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]