Click here to switch to the map view.

The map label for this gene is 116327782

Identifier: 116327782

GI number: 116327782

Start: 1216427

End: 1217236

Strand: Reverse

Name: 116327782

Synonym: LBL_1042

Alternate gene names: NA

Gene position: 1217236-1216427 (Counterclockwise)

Preceding gene: 116327783

Following gene: 116327781

Centisome position: 33.68

GC content: 42.47

Gene sequence:

>810_bases
GTGCCGGATTCCGAAAAAAGAAAAAATCTCATTTTCATTCTTACCGGAATTATTTTTACGTTAGTGCTTTTAGATAAAAG
TACAGGATCCGGATTTTCACTCTCCGGAATCGAATTCCGAAATATTGGAAAGATGAGTCCGGAATCCTATCATTCAAAAG
GAAATCTCAATCACAAAGAGCTTATGGATCAAGCAGAAGACGAAATCCTGGGAGAACTTCTCCAAAACGGAGACGTCCAG
GTCTCCTCCGAAAATGAAAATTCCATCGAAGAAGATCTCAACGAAAACGACCTCGTTCCAGTCCTCGAACCTCCCCTTCC
ATCCATTAATTTAGAAAACGAATCACCTTCCGCCCCGATTCCTACGGACAAAGGAGAATTATCACTGTATTTCCTGAAAT
TTTATGGTAAAGGAAGTAAAAGCCATTCCAGACTTGTAAGGGTCCTCCGACTTTCCAAGGGCGGGGACAGGGTCAAACTG
ATCTTAAATTCCCTGATTGCAGGTCCGGTTTCCCAAGAGAAGGAAAAAGGAATTCTGAATTCCATTCCACAAAACCTACA
TTATGACGGAGATTATAGAATTGAAGAAGGAATTTTAAAACTCTCTTTGAGCAGCGATTTAGAAAGAGGAGCCGGACCGG
AACTCCTAAAAGACCGGATCGACCAACTTACCTATAGCCTCATGGAAAATCTTCCGATCCGAGGCATCCGGCTTAAGATC
AACGGCAAATTCGTACGATCTCTCGGTGGGGAGGGAATGCCTTTACCTTCTCTTCTGACAAAAAACCCTAGAAAGATCGT
CGTTTTTTAA

Upstream 100 bases:

>100_bases
ATTCCGGACTTTGAATTGGAACTCAAAAACCTTTCCGATCTGAACGCAATTCTCTGATTTTTGCCTGTATGGATTCCTCT
TTTCTTCCGAAAATGAAAAA

Downstream 100 bases:

>100_bases
TCGTCAAAGAACGTATAATACAAAGTCGCCCAAACGGATTTATAAATCCTGATTGTTTAAACAAAATCGCTTCTAAAAAT
AGGGAGTTTAGATCTTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MPDSEKRKNLIFILTGIIFTLVLLDKSTGSGFSLSGIEFRNIGKMSPESYHSKGNLNHKELMDQAEDEILGELLQNGDVQ
VSSENENSIEEDLNENDLVPVLEPPLPSINLENESPSAPIPTDKGELSLYFLKFYGKGSKSHSRLVRVLRLSKGGDRVKL
ILNSLIAGPVSQEKEKGILNSIPQNLHYDGDYRIEEGILKLSLSSDLERGAGPELLKDRIDQLTYSLMENLPIRGIRLKI
NGKFVRSLGGEGMPLPSLLTKNPRKIVVF

Sequences:

>Translated_269_residues
MPDSEKRKNLIFILTGIIFTLVLLDKSTGSGFSLSGIEFRNIGKMSPESYHSKGNLNHKELMDQAEDEILGELLQNGDVQ
VSSENENSIEEDLNENDLVPVLEPPLPSINLENESPSAPIPTDKGELSLYFLKFYGKGSKSHSRLVRVLRLSKGGDRVKL
ILNSLIAGPVSQEKEKGILNSIPQNLHYDGDYRIEEGILKLSLSSDLERGAGPELLKDRIDQLTYSLMENLPIRGIRLKI
NGKFVRSLGGEGMPLPSLLTKNPRKIVVF
>Mature_268_residues
PDSEKRKNLIFILTGIIFTLVLLDKSTGSGFSLSGIEFRNIGKMSPESYHSKGNLNHKELMDQAEDEILGELLQNGDVQV
SSENENSIEEDLNENDLVPVLEPPLPSINLENESPSAPIPTDKGELSLYFLKFYGKGSKSHSRLVRVLRLSKGGDRVKLI
LNSLIAGPVSQEKEKGILNSIPQNLHYDGDYRIEEGILKLSLSSDLERGAGPELLKDRIDQLTYSLMENLPIRGIRLKIN
GKFVRSLGGEGMPLPSLLTKNPRKIVVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29850; Mature: 29718

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSEKRKNLIFILTGIIFTLVLLDKSTGSGFSLSGIEFRNIGKMSPESYHSKGNLNHKE
CCCCHHHCCEEEEHHHHHHHHHHHCCCCCCCCEECCCEECCCCCCCCHHHCCCCCCCHHH
LMDQAEDEILGELLQNGDVQVSSENENSIEEDLNENDLVPVLEPPLPSINLENESPSAPI
HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCEEECCCCCCCEECCCCCCCCC
PTDKGELSLYFLKFYGKGSKSHSRLVRVLRLSKGGDRVKLILNSLIAGPVSQEKEKGILN
CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCHHH
SIPQNLHYDGDYRIEEGILKLSLSSDLERGAGPELLKDRIDQLTYSLMENLPIRGIRLKI
HCCHHCCCCCCEEEECCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
NGKFVRSLGGEGMPLPSLLTKNPRKIVVF
CCHHHHHCCCCCCCCCHHHCCCCCEEEEC
>Mature Secondary Structure 
PDSEKRKNLIFILTGIIFTLVLLDKSTGSGFSLSGIEFRNIGKMSPESYHSKGNLNHKE
CCCHHHCCEEEEHHHHHHHHHHHCCCCCCCCEECCCEECCCCCCCCHHHCCCCCCCHHH
LMDQAEDEILGELLQNGDVQVSSENENSIEEDLNENDLVPVLEPPLPSINLENESPSAPI
HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCEEECCCCCCCEECCCCCCCCC
PTDKGELSLYFLKFYGKGSKSHSRLVRVLRLSKGGDRVKLILNSLIAGPVSQEKEKGILN
CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCHHH
SIPQNLHYDGDYRIEEGILKLSLSSDLERGAGPELLKDRIDQLTYSLMENLPIRGIRLKI
HCCHHCCCCCCEEEECCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
NGKFVRSLGGEGMPLPSLLTKNPRKIVVF
CCHHHHHCCCCCCCCCHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA