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The map label for this gene is gph [H]

Identifier: 116327783

GI number: 116327783

Start: 1217280

End: 1217954

Strand: Reverse

Name: gph [H]

Synonym: LBL_1043

Alternate gene names: 116327783

Gene position: 1217954-1217280 (Counterclockwise)

Preceding gene: 116327787

Following gene: 116327782

Centisome position: 33.7

GC content: 42.96

Gene sequence:

>675_bases
ATGACCGATTTTTCCGTTGATTTTCTCCAAACGCTTGCATTCGACGTAGATGGAACCTTATTTTCGTCCGAAGGGATGAT
ACTCGAAGTCTACAGAGACTCAATCCGAAATTTTTCCGAAACTTTCAAAATCCAAATCTCTCTTCCATCCAGAGATCAAC
TTATGATGGAAATCGGAAAGCCTGTCAAAACCATTTTCCGCAATCTTCTTCCACAATTGAACGAAGAACAAAGAGACGCC
ATTTCCGATAGTGTGCTTCGTTTTTTATGCGAGAGAATTAAAAAAGGAGAGGGAGAACTCTATCCCTCGGTCAAAGAAAC
GATCGAGTCTCTTTCAAAAAAAGGGTTTCGAATTCTAGCGGCTTCAAACGGACGAAAACCTTATATCGAAACCATCTTGG
AAGTAGCGGGAGTTCTTTCCTATTTCGATCCGATCCTCGTTTTAGACAACGAGCGGATCAAAACCAAGGGAGAAATTCTG
AAAGAATACATCAAACGAAACGATCTTAAACCGAACGAAATTCTCATGATAGGAGACAGACTTTCAGATCACGAGGCCGC
CCGTCAGAACGGTTGTCCGTTTGCGTTTTGCTCGTACGGACACGCGCCTCCCGGAGAAATTCCGGACTTTGAATTGGAAC
TCAAAAACCTTTCCGATCTGAACGCAATTCTCTGA

Upstream 100 bases:

>100_bases
TTCATAAGAAGTTCTTCCTATTTTCTCCGACTCCGGGGAAAATCAAGCAAAGGGAAAAAGAAAATGTCAAAAGAATTCGT
TTCCGAAAAGTTGTCCTTTG

Downstream 100 bases:

>100_bases
TTTTTGCCTGTATGGATTCCTCTTTTCTTCCGAAAATGAAAAAGTGCCGGATTCCGAAAAAAGAAAAAATCTCATTTTCA
TTCTTACCGGAATTATTTTT

Product: phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTDFSVDFLQTLAFDVDGTLFSSEGMILEVYRDSIRNFSETFKIQISLPSRDQLMMEIGKPVKTIFRNLLPQLNEEQRDA
ISDSVLRFLCERIKKGEGELYPSVKETIESLSKKGFRILAASNGRKPYIETILEVAGVLSYFDPILVLDNERIKTKGEIL
KEYIKRNDLKPNEILMIGDRLSDHEAARQNGCPFAFCSYGHAPPGEIPDFELELKNLSDLNAIL

Sequences:

>Translated_224_residues
MTDFSVDFLQTLAFDVDGTLFSSEGMILEVYRDSIRNFSETFKIQISLPSRDQLMMEIGKPVKTIFRNLLPQLNEEQRDA
ISDSVLRFLCERIKKGEGELYPSVKETIESLSKKGFRILAASNGRKPYIETILEVAGVLSYFDPILVLDNERIKTKGEIL
KEYIKRNDLKPNEILMIGDRLSDHEAARQNGCPFAFCSYGHAPPGEIPDFELELKNLSDLNAIL
>Mature_223_residues
TDFSVDFLQTLAFDVDGTLFSSEGMILEVYRDSIRNFSETFKIQISLPSRDQLMMEIGKPVKTIFRNLLPQLNEEQRDAI
SDSVLRFLCERIKKGEGELYPSVKETIESLSKKGFRILAASNGRKPYIETILEVAGVLSYFDPILVLDNERIKTKGEILK
EYIKRNDLKPNEILMIGDRLSDHEAARQNGCPFAFCSYGHAPPGEIPDFELELKNLSDLNAIL

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=214, Percent_Identity=22.4299065420561, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 25472; Mature: 25340

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFSVDFLQTLAFDVDGTLFSSEGMILEVYRDSIRNFSETFKIQISLPSRDQLMMEIGK
CCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCHHHEEEEEEECCCHHHHHHHHCC
PVKTIFRNLLPQLNEEQRDAISDSVLRFLCERIKKGEGELYPSVKETIESLSKKGFRILA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEE
ASNGRKPYIETILEVAGVLSYFDPILVLDNERIKTKGEILKEYIKRNDLKPNEILMIGDR
ECCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC
LSDHEAARQNGCPFAFCSYGHAPPGEIPDFELELKNLSDLNAIL
CCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCHHHHHHCC
>Mature Secondary Structure 
TDFSVDFLQTLAFDVDGTLFSSEGMILEVYRDSIRNFSETFKIQISLPSRDQLMMEIGK
CCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCHHHEEEEEEECCCHHHHHHHHCC
PVKTIFRNLLPQLNEEQRDAISDSVLRFLCERIKKGEGELYPSVKETIESLSKKGFRILA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEE
ASNGRKPYIETILEVAGVLSYFDPILVLDNERIKTKGEILKEYIKRNDLKPNEILMIGDR
ECCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC
LSDHEAARQNGCPFAFCSYGHAPPGEIPDFELELKNLSDLNAIL
CCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA